Evidence map›Paper›PMID 25316211›Full record

ArticleExtremophiles : life under extreme conditions2015

Genome sequence analysis of Pseudomonas extremaustralis provides new insights into environmental adaptability and extreme conditions resistance.

Laura J Raiger Iustman, Paula M Tribelli, José G Ibarra, Mariela V Catone, Esmeralda C Solar Venero, Nancy I López

Abstract read
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In one paragraph

Article in Extremophiles : life under extreme conditions, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
2.2field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it, 53 citations in OpenAlex.

  1. Pooled it
  2. From genome to lifestyle: adaptive strategies ofApplied and environmental microbiology · 2026
    Article
  3. Review
  4. Article
  5. Current research in microbial sciences · 2025
    Article
  6. Article
  7. Article
  8. Efficient low-temperature wastewater treatment byFrontiers in microbiology · 2024
    Article
  9. Review
  10. Review
  11. Evolutionary Divergence ofFrontiers in microbiology · 2022
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Genome Sequencing ofFrontiers in microbiology · 2019
    Article
  19. Effect of copper on diesel degradation in Pseudomonas extremaustralis.Extremophiles : life under extreme conditions · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Laura J Raiger IustmanDepartamento de Química Biológica, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Intendente Güiraldes 2160, C1428EGA, Buenos Aires, Argentina.
Paula M Tribelli
José G Ibarra
Mariela V Catone
Esmeralda C Solar Venero
Nancy I López
University of Buenos Aires · ARFundación Ciencias Exactas y Naturales · ARInstituto de Química y Fisicoquímica Biológicas · AR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genome of the Antarctic bacterium Pseudomonas extremaustralis was analyzed searching for genes involved in environmental adaptability focusing on anaerobic metabolism, osmoregulation, cold adaptation, exopolysaccharide production and degradation of complex compounds. Experimental evidences demonstrated the functionality of several of these pathways, including arginine and pyruvate fermentation, alginate production and growth under cold conditions. Phylogenetic analysis along with genomic island prediction allowed the detection of genes with probable foreign origin such as those coding for acetate kinase, osmotic resistance and colanic acid biosynthesis. These findings suggest that in P. extremaustralis the horizontal transfer events and/or gene redundancy could play a key role in the survival under unfavorable conditions. Comparative genome analysis of these traits in other representative Pseudomonas species highlighted several similarities and differences with this extremophile bacterium.

Indexed as

Genome, BacterialAcetate KinaseAdaptation, BiologicalAdenosine TriphosphatasesAlginatesAntarctic RegionsArginineCold TemperatureComputational BiologyCoumaric AcidsEnvironmentFermentationOsmosisPhenotypePhylogenyPolysaccharidesAcetate KinaseAdenosine TriphosphatasesAlginatesArgininecolanic acidCoumaric Acidsferulic acidPolysaccharidesPyruvatesTrehalose

Identifiers

PMID25316211
OpenAlexW2013983585

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.