Evidence map›Paper›PMID 25316062›Full record

ArticleJournal of experimental botany2015

Rab geranylgeranyl transferase β subunit is essential for male fertility and tip growth in Arabidopsis.

Malgorzata Gutkowska, Marta Wnuk, Julita Nowakowska, Malgorzata Lichocka, Michal M Stronkowski, Ewa Swiezewska

Open access · greenAbstract read
In one paragraph

Article in Journal of experimental botany, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
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  6. Article
  7. Article
  8. Article
  9. Review
  10. Functional Gene Network of Prenyltransferases inMolecules (Basel, Switzerland) · 2019
    Review
  11. Protein Prenylation in Plant Stress Responses.Molecules (Basel, Switzerland) · 2019
    Review
  12. Review
  13. Review
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Malgorzata GutkowskaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Pawińskiego 5a, 02-106 Warsaw, Poland gosiag@ibb.waw.pl.
Marta WnukInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Pawińskiego 5a, 02-106 Warsaw, Poland.
Julita NowakowskaWarsaw University, Faculty of Biology, Miecznikowa 1, 02-096 Warsaw, Poland.
Malgorzata LichockaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Pawińskiego 5a, 02-106 Warsaw, Poland.
Michal M StronkowskiWarsaw University of Technology, Faculty of Mathematics and Information Science, Koszykowa 75, 00-662 Warsaw, Poland.
Ewa SwiezewskaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Pawińskiego 5a, 02-106 Warsaw, Poland.
Institute of Biochemistry and Biophysics, Polish Academy of Sciences · PLUniversity of Warsaw · PLWarsaw University of Technology · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rab proteins, key players in vesicular transport in all eukaryotic cells, are post-translationally modified by lipid moieties. Two geranylgeranyl groups are attached to the Rab protein by the heterodimeric enzyme Rab geranylgeranyl transferase (RGT) αβ. Partial impairment in this enzyme activity in Arabidopsis, by disruption of the AtRGTB1 gene, is known to influence plant stature and disturb gravitropic and light responses. Here it is shown that mutations in each of the RGTB genes cause a tip growth defect, visible as root hair and pollen tube deformations. Moreover, FM 1-43 styryl dye endocytosis and recycling are affected in the mutant root hairs. Finally, it is demonstrated that the double mutant, with both AtRGTB genes disrupted, is non-viable due to absolute male sterility. Doubly mutated pollen is shrunken, has an abnormal exine structure, and shows strong disorganization of internal membranes, particularly of the endoplasmic reticulum system.

Indexed as

MutationAlkyl and Aryl TransferasesAmino Acid SequenceArabidopsisArabidopsis ProteinsBase SequenceFertilityFlowersMolecular Sequence DataPollenPollen TubeReproductionTransferasesAlkyl and Aryl TransferasesArabidopsis ProteinsRab geranylgeranyltransferaseRab geranylgeranyl transferase beta-subunitTransferasesArabidopsismale fertilitypollenpollen tubeprotein prenylationRab geranylgeranyl transferaseRab proteinroot hairtip growth.

Identifiers

PMID25316062
PMCPMC4265159
OpenAlexW2170237620

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.