Evidence map›Paper›PMID 25314618›Full record

ArticleMolecular ecology2014

Comparative functional genomics of adaptation to muscular disuse in hibernating mammals.

Vadim B Fedorov, Anna V Goropashnaya, Nathan C Stewart, Øivind Tøien, Celia Chang, Haifang Wang, Jun Yan, Louise C Showe, Michael K Showe, Brian M Barnes

Abstract read
In one paragraph

Article in Molecular ecology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
6.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 66 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Skeletal muscle preservation in arctic ground squirrels during hibernation season.Comparative biochemistry and physiology. Part A, Molecular & integrative physiology · 2025
    Article
  7. Article
  8. Microbial urea-nitrogen recycling in arctic ground squirrels: the effect of ambient temperature of hibernation.Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology · 2024
    Article
  9. Review
  10. Article
  11. Article
  12. Pre-hibernation diet alters skeletal muscle relaxation kinetics, but not force development in torpid arctic ground squirrels.Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology · 2024
    Article
  13. Review
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  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Vadim B FedorovInstitute of Arctic Biology, University of Alaska Fairbanks, Fairbanks, AK, 99775, USA.
Anna V Goropashnaya
Nathan C Stewart
Øivind Tøien
Celia Chang
Haifang Wang
Jun Yan
Louise C Showe
Michael K Showe
Brian M Barnes
University of Alaska Fairbanks · USThe Wistar Institute · USShanghai Institutes for Biological Sciences · CN

Funding

Overcoming Disuse Atrophy and Osteoporosis in Hibernating MammalsR21AR064995 · NIAMS · UNIVERSITY OF ALASKA FAIRBANKS · PI FEDOROV, VADIM · 2014 to 2015
$363k
NIAMS NIH HHS R21 AR064995NIAMS NIH HHS R21AR064995
6 · The paper itself

Abstract

Hibernation is an energy-saving adaptation that involves a profound suppression of physical activity that can continue for 6-8 months in highly seasonal environments. While immobility and disuse generate muscle loss in most mammalian species, in contrast, hibernating bears and ground squirrels demonstrate limited muscle atrophy over the prolonged periods of physical inactivity during winter, suggesting that hibernating mammals have adaptive mechanisms to prevent disuse muscle atrophy. To identify common transcriptional programmes that underlie molecular mechanisms preventing muscle loss, we conducted a large-scale gene expression screen in hind limb muscles comparing hibernating and summer-active black bears and arctic ground squirrels using custom 9600 probe cDNA microarrays. A molecular pathway analysis showed an elevated proportion of overexpressed genes involved in all stages of protein biosynthesis and ribosome biogenesis in muscle of both species during torpor of hibernation that suggests induction of translation at different hibernation states. The induction of protein biosynthesis probably contributes to attenuation of disuse muscle atrophy through the prolonged periods of immobility of hibernation. The lack of directional changes in genes of protein catabolic pathways does not support the importance of metabolic suppression for preserving muscle mass during winter. Coordinated reduction in multiple genes involved in oxidation-reduction and glucose metabolism detected in both species is consistent with metabolic suppression and lower energy demand in skeletal muscle during inactivity of hibernation.

Indexed as

Comparative Genomic HybridizationHibernationAdaptation, PhysiologicalAnimalsMaleMuscular AtrophyOligonucleotide Array Sequence AnalysisProtein BiosynthesisSciuridaeTranscriptomeUrsidaearctic ground squirrelblack bearfunctional genomicsgene expressionhibernationprotein biosynthesis

Identifiers

PMID25314618
PMCPMC4245363
OpenAlexW2064676676

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.