Evidence map›Paper›PMID 25313668›Full record

ArticlePloS one2014

Structural characteristic of the initial unfolded state on refolding determines catalytic efficiency of the folded protein in presence of osmolytes.

Marina Warepam, Gurumayum Suraj Sharma, Tanveer Ali Dar, Md Khurshid Alam Khan, Laishram Rajendrakumar Singh

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 10 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Marina WarepamDr. B. R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi, India.
Gurumayum Suraj SharmaDr. B. R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi, India.
Tanveer Ali DarDepartment of Clinical Biochemistry, University of Kashmir, Srinagar, Jammu & Kashmir, India.
Md Khurshid Alam KhanSchool of Life Sciences, B.S. Abdur Rahman University, Chennai, India.
Laishram Rajendrakumar SinghDr. B. R. Ambedkar Center for Biomedical Research, University of Delhi, Delhi, India.
Ambedkar University Delhi · INB.S. Abdur Rahman Crescent Institute of Science & Technology · INUniversity of Kashmir · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Osmolytes are low molecular weight organic molecules accumulated by organisms to assist proper protein folding, and to provide protection to the structural integrity of proteins under denaturing stress conditions. It is known that osmolyte-induced protein folding is brought by unfavorable interaction of osmolytes with the denatured/unfolded states. The interaction of osmolyte with the native state does not significantly contribute to the osmolyte-induced protein folding. We have therefore investigated if different denatured states of a protein (generated by different denaturing agents) interact differently with the osmolytes to induce protein folding. We observed that osmolyte-assisted refolding of protein obtained from heat-induced denatured state produces native molecules with higher enzyme activity than those initiated from GdmCl- or urea-induced denatured state indicating that the structural property of the initial denatured state during refolding by osmolytes determines the catalytic efficiency of the folded protein molecule. These conclusions have been reached from the systematic measurements of enzymatic kinetic parameters (Km and kcat), thermodynamic stability (Tm and ΔHm) and secondary and tertiary structures of the folded native proteins obtained from refolding of various denatured states (due to heat-, urea- and GdmCl-induced denaturation) of RNase-A in the presence of various osmolytes.

Indexed as

BiocatalysisCircular DichroismGuanidineHydrogen-Ion ConcentrationKineticsOsmolar ConcentrationProtein DenaturationProtein RefoldingRibonuclease, PancreaticTemperatureThermodynamicsUreaGuanidineRibonuclease, PancreaticUrea

Identifiers

PMID25313668
PMCPMC4196897
OpenAlexW2022432601

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.