Evidence map›Paper›PMID 25313406›Full record

ArticleThe Journal of cell biology2014

Bem1p contributes to secretory pathway polarization through a direct interaction with Exo70p.

Dongmei Liu, Peter Novick

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.1field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 34 citations in OpenAlex.

  1. Regulation of yeast polarized exocytosis by phosphoinositide lipids.Cellular and molecular life sciences : CMLS · 2024
    Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Regulation of Cell Polarity by Exocyst-Mediated Trafficking.Cold Spring Harbor perspectives in biology · 2018
    Review
  14. Article
  15. Rewiring a Rab regulatory network reveals a possible inhibitory role for the vesicle tether, Uso1.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  16. Article
  17. Article
  18. Review
  19. Formins: linking cytoskeleton and endomembranes in plant cells.International journal of molecular sciences · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Dongmei LiuDepartment of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, CA 92130.
Peter NovickDepartment of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, CA 92130 pnovick@ucsd.edu.
University of California, San Diego · US

Funding

GENETICS OF SECRETION IN YEASTR01GM035370 · NIGMS · YALE UNIVERSITY · PI PETER Jay NOVICK · 1985 to 2026
$7.0M
Coordination of membrane traffic through rab GEF and GAP cascadesR01GM082861 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI NOVICK, PETER JAY · 2008 to 2020
$4.4M
Genetics of Secretion in YeastR37GM035370 · NIGMS · YALE UNIVERSITY · PI NOVICK, PETER JAY · 2001 to 2010
$3.9M
NIGMS NIH HHS GM35370NIGMS NIH HHS R01 GM035370NIGMS NIH HHS R01 GM082861NIGMS NIH HHS R37 GM035370
6 · The paper itself

Abstract

The exocyst serves to tether secretory vesicles to cortical sites specified by polarity determinants, in preparation for fusion with the plasma membrane. Although most exocyst components are brought to these sites by riding on secretory vesicles as they are actively transported along actin cables, Exo70p displays actin-independent localization to these sites, implying an interaction with a polarity determinant. Here we show that Exo70p directly and specifically binds to the polarity determinant scaffold protein Bem1p. The interaction involves multiple domains of both Exo70p and Bem1p. Mutations in Exo70p that disrupt its interaction with Bem1, without impairing its interactions with other known binding partners, lead to the loss of actin-independent localization. Synthetic genetic interactions confirm the importance of the Exo70p-Bem1p interaction, although there is some possible redundancy with Sec3p and Sec15p, other exocyst components that also interact with polarity determinants. Similar to Sec3p, the actin-independent localization of Exo70p requires a synergistic interaction with the phosphoinositide PI(4,5)P2.

Indexed as

Actin CytoskeletonAdaptor Proteins, Signal TransducingAmino Acid SequenceBinding SitesCell Cycle ProteinsCell MembraneCyclin-Dependent KinasesGTP PhosphohydrolasesGuanine Nucleotide Exchange FactorsMembrane ProteinsMolecular Sequence DataMutationPhosphatidylinositol 4,5-DiphosphateProtein BindingProtein IsoformsProtein Structure, TertiaryAdaptor Proteins, Signal TransducingBEM1 protein, S cerevisiaeCDC10 protein, S cerevisiaeCDC24 protein, S cerevisiaeCell Cycle ProteinsCyclin-Dependent KinasesEXO70 protein, S cerevisiaeGIN4 protein, S cerevisiaeGTP PhosphohydrolasesGuanine Nucleotide Exchange FactorsMembrane ProteinsPhosphatidylinositol 4,5-DiphosphateProtein IsoformsRHO3 protein, S cerevisiaerho GTP-Binding ProteinsSaccharomyces cerevisiae ProteinsSEC15 protein, S cerevisiaeSEC3 protein, S cerevisiaeVesicular Transport Proteins

Identifiers

PMID25313406
PMCPMC4195821
OpenAlexW2000648299

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.