Evidence map›Paper›PMID 25312777›Full record

ReviewPlasmid2015

The Type I toxin-antitoxin par locus from Enterococcus faecalis plasmid pAD1: RNA regulation by both cis- and trans-acting elements.

Keith E Weaver

Open access · greenAbstract readReview
In one paragraph

Review in Plasmid, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Review
  3. Enterococcal Genetics.Microbiology spectrum · 2019
    Review
  4. A Novel Detection ofInfection and drug resistance · 2019
    Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Keith E WeaverDivision of Basic Biomedical Sciences, Sanford School of Medicine, University of South Dakota, Vermillion, SD 57069, USA. Electronic address: kweaver@usd.edu.
University of South Dakota · US

Funding

Study of stability genes of E. faecalis plasmid pAD1R01GM055544 · NIGMS · UNIVERSITY OF SOUTH DAKOTA · PI WEAVER, KEITH E · 1999 to 2006
$1.2M
NIGMS NIH HHS R01 GM055544
6 · The paper itself

Abstract

The pAD1 par determinant was the first Type I toxin-antitoxin system identified in Gram-positive bacteria and has recently been shown to be the prototype of a family of loci that is widespread in these organisms. All family members have (i) convergently transcribed toxin message and regulatory RNAs, (ii) three non-contiguous complementary regions for potential interaction, and (iii) intramolecular structures within the toxin message that modulate translation and transcript stability. Therefore, the detailed information available on the par locus provides a paradigm for studying the function and mechanism of regulation of the related loci.

Indexed as

PlasmidsAntitoxinsBacterial ToxinsBase SequenceEnterococcus faecalisGene Expression Regulation, BacterialMolecular Sequence DataRNA, AntisenseRNA StabilityAntitoxinsBacterial ToxinsRNA, AntisenseAntisense RNAPlasmid stabilityPost-segregational killingsRNAToxin–antitoxin system

Identifiers

PMID25312777
PMCPMC4385395
OpenAlexW1996420910

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.