Evidence map›Paper›PMID 25308000›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2015

Generation of mice lacking DUF1220 protein domains: effects on fecundity and hyperactivity.

J G Keeney, M S O'Bleness, N Anderson, J M Davis, N Arevalo, N Busquet, W Chick, J Rozman, S M Hölter, L Garrett and 8 more

Open access · greenAbstract read
In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 7 institutions in 2 countries.

J G KeeneyDepartment of Biochemistry and Molecular Genetics and Human Medical Genetics and Neuroscience Programs, University of Colorado School of Medicine, Anschutz Medical Campus, Aurora, CO, 80045, USA.
M S O'Bleness
N Anderson
J M Davis
N Arevalo
N Busquet
W Chick
J Rozman
S M Hölter
L Garrett
M Horsch
German Mouse Clinic Consortium
J Beckers
W Wurst
M Klingenspor
D Restrepo
M Hrabě de Angelis
J M Sikela
University of Colorado Anschutz Medical Campus · USHelmholtz Zentrum München · DEDeutsches Diabetes-Zentrum e.V. · DEFresenius (Germany) · DEGerman Center for Diabetes Research · DELudwig-Maximilians-Universität München · DEWeihenstephan-Triesdorf University of Applied Sciences · DE

Funding

Investigation of DUF1220 Domains in Human Brain Function and DiseaseR01MH081203 · NIMH · UNIVERSITY OF COLORADO DENVER · PI SIKELA, JAMES M · 2009 to 2013
$2.0M
Transgenic mice containing human DUF1220 domainsR21MH089917 · NIMH · UNIVERSITY OF COLORADO DENVER · PI SIKELA, JAMES M · 2010 to 2011
$296k
Transgenic mice containing human DUF1220 domainsR33MH089917 · NIMH · UNIVERSITY OF COLORADO DENVER · PI SIKELA, JAMES M · 2012 to 2012
$226k
NIMH NIH HHS 3R01 MH08120302S1NIMH NIH HHS 5R01 MH081203-05NIMH NIH HHS 5R21-R33 MH089917-03NIMH NIH HHS R01 MH081203NIMH NIH HHS R33 MH089917
6 · The paper itself

Abstract

Sequences encoding DUF1220 protein domains show the most extreme human lineage-specific copy number increase of any coding region in the genome and have been linked to human brain evolution. In addition, DUF1220 copy number (dosage) has been implicated in influencing brain size within the human species, both in normal populations and in individuals associated with brain size pathologies (1q21-associated microcephaly and macrocephaly). More recently, increasing dosage of a subtype of DUF1220 has been linked with increasing severity of the primary symptoms of autism. Despite these intriguing associations, a function for these domains has not been described. As a first step in addressing this question, we have developed the first transgenic model of DUF1220 function by removing the single DUF1220 domain (the ancestral form) encoded in the mouse genome. In a hypothesis generating exercise, these mice were evaluated by 197 different phenotype measurements. While resulting DUF1220-minus (KO) mice show no obvious anatomical peculiarities, they exhibit a significantly reduced fecundity (χ(2) = 19.1, df = 2, p = 7.0 × 10(-5)). Further extensive phenotypic analyses suggest hyperactivity (p < 0.05) of DUF1220 mice and changes in gene expression levels of brain associated with distinct neurological functions and disease. Other changes that met statistical significance include an increase in plasma glucose concentration (as measured by area under the curve, AUC 0-30 and AUC 30-120) in male mutants, fasting glucose levels, reduce sodium levels in male mutants, increased levels of the liver functional indicator ALAT/GPT in males, levels of alkaline phosphatase (also an indicator of liver function), mean R and SR amplitude by electrocardiography, elevated IgG3 levels, a reduced ratio of CD4:CD8 cells, and a reduced frequency of T cells; though it should be noted that many of these differences are quite small and require further examination. The linking of DUF1220 loss to a hyperactive phenotype is consistent with separate findings in which DUF1220 over expression results in a down-regulation of mitochondrial function, and potentially suggests a role in developmental metabolism. Finally, the substantially reduced fecundity we observe associated with KO mice argues that the ancestral DUF1220 domain provides an important biological functionthat is critical to survivability and reproductive success.

Indexed as

Biological EvolutionGene DosagePhenotypeAnimalsArea Under CurveBlood GlucoseBrainCalorimetry, IndirectDNA PrimersFertilityGene Expression ProfilingGene Knockout TechniquesHyperkinesisLiverMaleMiceBlood GlucoseDNA Primers

Identifiers

PMID25308000
PMCPMC4305498
OpenAlexW1992210738

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.