Evidence map›Paper›PMID 25306186›Full record

ArticleThrombosis research2014

Genetic variants in Cell Adhesion Molecule 1 (CADM1): a validation study of a novel endothelial cell venous thrombosis risk factor.

Hugoline G de Haan, Irene D Bezemer, Carla Y Vossen, Astrid van Hylckama Vlieg, Stefan Böehringer, Sandra J Hasstedt, Samuel Levy, Frits R Rosendaal, Edwin G Bovill

Open access · greenAbstract readEvaluation StudyValidation Study
In one paragraph

Article in Thrombosis research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Hugoline G de HaanDepartment of Clinical Epidemiology, Leiden University Medical Center, Leiden, The Netherlands. Electronic address: h.g.de_haan@lumc.nl.
Irene D BezemerDepartment of Clinical Epidemiology, Leiden University Medical Center, Leiden, The Netherlands.
Carla Y VossenDepartment of Clinical Epidemiology, Leiden University Medical Center, Leiden, The Netherlands; Department of Medical Genetics, University Medical Center Utrecht, Utrecht, The Netherlands.
Astrid van Hylckama VliegDepartment of Clinical Epidemiology, Leiden University Medical Center, Leiden, The Netherlands.
Stefan BöehringerDepartment of Medical Statistics and Bioinformatics, Leiden University Medical Center, Leiden, The Netherlands.
Sandra J HasstedtDepartment of Human Genetics, University of Utah, Salt Lake City, UT, USA.
Samuel LevyScripps Translational Science Institute, Scripps Research Institute, San Diego, CA, USA.
Frits R RosendaalDepartment of Clinical Epidemiology, Leiden University Medical Center, Leiden, The Netherlands.
Edwin G BovillDepartment of Pathology, University of Vermont, Burlington, VT, USA. Electronic address: edwin.bovill@uvm.edu.
Leiden University Medical Center · NLScripps Research Institute · USUniversity of Utah · USUniversity of Vermont · US

Funding

VENOUS THROMBOEMBOLISM: GENES, RISK, MANAGEMENTP01HL046703 · NHLBI · UNIVERSITY OF VERMONT &ST AGRIC COLLEGE · PI BRUMMEL-ZIEDINS, KATHLEEN E · 1991 to 2011
$19.8M
MODELS FOR THE GENETIC EPIDEMIOLOGY OF CHRONIC DISEASESR01HD017463 · NICHD · UNIVERSITY OF UTAH · PI HASSTEDT, SANDRA J · 1987 to 2009
$1.7M
NHLBI NIH HHS N01 HV048195NHLBI NIH HHS N01-HV-48195NHLBI NIH HHS P01 HL046703NHLBI NIH HHS P01 HL46703NICHD NIH HHS R01 HD017463
6 · The paper itself

Abstract

introductionIn a protein C deficient family, we recently identified a candidate gene, CADM1, which interacted with protein C deficiency in increasing the risk of venous thrombosis (VT). This study aimed to determine whether CADM1 variants also interact with protein C pathway abnormalities in increasing VT risk outside this family. MATERIALS AND

methodsWe genotyped over 300 CADM1 variants in the population-based MEGA case-control study. We compared VT risks between cases with low protein C activity (n=194), low protein S levels (n=23), high factor VIII activity (n=165) or factor V Leiden carriers (n=580), and all 4004 controls. Positive associations were repeated in all 3496 cases and 4004 controls.

resultsWe found 22 variants which were associated with VT in one of the protein C pathway risk groups. After mutual adjustment, six variants remained associated with VT. The strongest evidence was found for rs220842 and rs11608105. For rs220842, the odds ratio (OR) for VT was 3.2 (95% CI 1.2-9.0) for cases with high factor VIII activity compared with controls. In addition, this variant was associated with an increased risk of VT in the overall study population (OR: 1.5, 95% CI 1.0-2.2). The other variant, rs11608105, was not associated with VT in the overall study population (OR: 1.0, 95% CI 0.8-1.1), but showed a strong effect on VT risk (OR: 21, 95% CI 5.1-88) when combined with low protein C or S levels.

conclusionsIn a population-based association study, we confirm a role for CADM1 variants in increasing the risk of VT by interaction with protein C pathway abnormalities.

Indexed as

AdolescentAdultAgedCell Adhesion Molecule-1Cell Adhesion MoleculesComorbidityEndothelial CellsFemaleGenetic MarkersGenetic Predisposition to DiseaseGenetic VariationHumansImmunoglobulinsIncidenceMaleMiddle AgedCADM1 protein, humanCell Adhesion Molecule-1Cell Adhesion MoleculesGenetic MarkersImmunoglobulinsProtein CCADM1genetic variationprotein C pathwayvenous thrombosis

Identifiers

PMID25306186
PMCPMC4252856
OpenAlexW2052674738

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.