Evidence map›Paper›PMID 25306109›Full record

ArticleNature structural & molecular biology2014

Cross-talking noncoding RNAs contribute to cell-specific neurodegeneration in SCA7.

Jennifer Y Tan, Keith W Vance, Miguel A Varela, Tamara Sirey, Lauren M Watson, Helen J Curtis, Martina Marinello, Sandro Alves, Bruno Steinkraus, Sarah Cooper and 9 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 107 citations in OpenAlex.

  1. Article
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  7. Review
  8. Progressive degeneration in a newResearch square · 2023
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. The emerging roles of long non-coding RNAs in polyglutamine diseases.Journal of cellular and molecular medicine · 2021
    Review
  14. Review
  15. Regulatory Potential of Competing Endogenous RNAs in Myotonic Dystrophies.International journal of molecular sciences · 2021
    Review
  16. Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors at 3 institutions in 3 countries.

Jennifer Y TanMRC Functional Genomics Unit, University of Oxford, Oxford, UK.
Keith W Vance *MRC Functional Genomics Unit, University of Oxford, Oxford, UK.
Miguel A Varela *University of Oxford, Department of Physiology, Anatomy and Genetics, Oxford, United Kingdom.
Tamara SireyMRC Functional Genomics Unit, University of Oxford, Oxford, UK.
Lauren M WatsonUniversity of Oxford, Department of Physiology, Anatomy and Genetics, Oxford, United Kingdom.
Helen J CurtisUniversity of Oxford, Department of Physiology, Anatomy and Genetics, Oxford, United Kingdom.
Martina MarinelloCentre de Recherche de l'Institut du Cerveau et de la Moëlle épinière, Hôpital de la Pitié-Salpêtrière, Paris, France.
Sandro AlvesCentre de Recherche de l'Institut du Cerveau et de la Moëlle épinière, Hôpital de la Pitié-Salpêtrière, Paris, France.
Bruno SteinkrausWeatherall Institute of Molecular Medicine, Radcliffe Department of Medicine, University of Oxford, Oxford, United Kingdom.
Sarah CooperUniversity of Oxford, Department of Biochemistry, Oxford, United Kingdom.
Tatyana NesterovaUniversity of Oxford, Department of Biochemistry, Oxford, United Kingdom.
Neil BrockdorffUniversity of Oxford, Department of Biochemistry, Oxford, United Kingdom.
Tudor FulgaWeatherall Institute of Molecular Medicine, Radcliffe Department of Medicine, University of Oxford, Oxford, United Kingdom.
Alexis BriceCentre de Recherche de l'Institut du Cerveau et de la Moëlle épinière, Hôpital de la Pitié-Salpêtrière, Paris, France.
Annie SittlerCentre de Recherche de l'Institut du Cerveau et de la Moëlle épinière, Hôpital de la Pitié-Salpêtrière, Paris, France.
Peter L OliverMRC Functional Genomics Unit, University of Oxford, Oxford, UK.
Matthew J WoodUniversity of Oxford, Department of Physiology, Anatomy and Genetics, Oxford, United Kingdom.
Chris P PontingMRC Functional Genomics Unit, University of Oxford, Oxford, UK.
Ana C MarquesMRC Functional Genomics Unit, University of Oxford, Oxford, UK.
University of Oxford · GBCentre National de la Recherche Scientifique · FRUniversity of Cape Town · ZA

Funding

European Research Council 249869Medical Research Council G0902418Medical Research Council MC_U137761446Medical Research Council MC_UU_12021/1Wellcome Trust 081385Wellcome Trust 103768
6 · The paper itself

Abstract

What causes the tissue-specific pathology of diseases resulting from mutations in housekeeping genes? Specifically, in spinocerebellar ataxia type 7 (SCA7), a neurodegenerative disorder caused by a CAG-repeat expansion in ATXN7 (which encodes an essential component of the mammalian transcription coactivation complex, STAGA), the factors underlying the characteristic progressive cerebellar and retinal degeneration in patients were unknown. We found that STAGA is required for the transcription initiation of miR-124, which in turn mediates the post-transcriptional cross-talk between lnc-SCA7, a conserved long noncoding RNA, and ATXN7 mRNA. In SCA7, mutations in ATXN7 disrupt these regulatory interactions and result in a neuron-specific increase in ATXN7 expression. Strikingly, in mice this increase is most prominent in the SCA7 disease-relevant tissues, namely the retina and cerebellum. Our results illustrate how noncoding RNA-mediated feedback regulation of a ubiquitously expressed housekeeping gene may contribute to specific neurodegeneration.

Indexed as

AnimalsAtaxin-7Cell Line, TumorCerebellumFeedback, PhysiologicalFemaleFibroblastsGene Expression ProfilingGene Expression RegulationHumansMaleMiceMicroRNAsMutationNerve Tissue ProteinsNeuronsAtaxin-7ATXN7 protein, humanAtxn7 protein, mouseMicroRNAsMIRN124 microRNA, humanNerve Tissue ProteinsRNA, Long NoncodingRNA, Messenger

Identifiers

PMID25306109
PMCPMC4255225
OpenAlexW2086765354

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.