Evidence map›Paper›PMID 25304367›Full record

ArticleJournal of inorganic biochemistry2014

Introduction of a covalent histidine-heme linkage in a hemoglobin: a promising tool for heme protein engineering.

Selena L Rice, Matthew R Preimesberger, Eric A Johnson, Juliette T J Lecomte

Open access · greenAbstract read
In one paragraph

Article in Journal of inorganic biochemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Selena L RiceT. C. Jenkins Department of Biophysics, Johns Hopkins University, Baltimore, MD 21218, USA.
Matthew R PreimesbergerT. C. Jenkins Department of Biophysics, Johns Hopkins University, Baltimore, MD 21218, USA.
Eric A JohnsonT. C. Jenkins Department of Biophysics, Johns Hopkins University, Baltimore, MD 21218, USA.
Juliette T J LecomteT. C. Jenkins Department of Biophysics, Johns Hopkins University, Baltimore, MD 21218, USA. Electronic address: lecomte_jtj@jhu.edu.
Johns Hopkins University · US

Funding

CELLULAR AND MOLECULAR BIOLOGYT32GM007231 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI VAN DOREN, MARK B · 1985 to 2020
$18.4M
PROGRAM IN MOLECULAR BIOPHYSICST32GM008403 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI BARRICK, DOUGLAS E. · 1990 to 2019
$13.5M
NIGMS NIH HHS T32 GM007231NIGMS NIH HHS T32 GM008403
6 · The paper itself

Abstract

The hemoglobins of the cyanobacteria Synechococcus and Synechocystis (GlbNs) are capable of spontaneous and irreversible attachment of the b heme to the protein matrix. The reaction, which saturates the heme 2-vinyl by addition of a histidine residue, is reproduced in vitro by preparing the recombinant apoprotein, adding ferric heme, and reducing the iron to the ferrous state. Spontaneous covalent attachment of the heme is potentially useful for protein engineering purposes. Thus, to explore whether the histidine-heme linkage can serve in such applications, we attempted to introduce it in a test protein. We selected as our target the heme domain of Chlamydomonas eugametos LI637 (CtrHb), a eukaryotic globin that exhibits less than 50% sequence identity with the cyanobacterial GlbNs. We chose two positions, 75 in the FG corner and 111 in the H helix, to situate a histidine near a vinyl group. We characterized the proteins with gel electrophoresis, absorbance spectroscopy, and NMR analysis. Both T111H and L75H CtrHbs reacted upon reduction of the ferric starting material containing cyanide as the distal ligand to the iron. With L75H CtrHb, nearly complete (>90%) crosslinking was observed to the 4-vinyl as expected from the X-ray structure of wild-type CtrHb. Reaction of T111H CtrHb also occurred at the 4-vinyl, in a 60% yield indicating a preference for the flipped heme orientation in the starting material. The work suggests that the His-heme modification will be applicable to the design of proteins with a non-dissociable heme group.

Indexed as

Protein EngineeringAmino Acid SubstitutionBacterial ProteinsChlamydomonasEscherichia coliGene ExpressionHemeHistidineModels, MolecularMutagenesis, Site-DirectedPlant ProteinsProtein Structure, SecondaryProtein Structure, TertiaryProtoporphyrinsRecombinant ProteinsSynechococcusBacterial ProteinsHemeHistidineiron protoporphyrin IXPlant ProteinsProtoporphyrinsRecombinant ProteinsTruncated Hemoglobins2/2 HemoglobinHeme post-translational modificationParamagnetic NMR spectroscopyProtein engineeringTruncated hemoglobin

Identifiers

PMID25304367
PMCPMC4278642
OpenAlexW2018219305

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.