ArticleCell2014
Advancing the microbiome research community.
Abstract read
In one paragraph
Article in Cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.
0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
37 citing papers in PubMed.
- Gut-bone axis perturbation: Mechanisms and interventions via gut microbiota as a primary driver of osteoporosis.Journal of orthopaedic translation · 2025Review
- Diet as an Optional Treatment in Adults With Inflammatory Bowel Disease: A Systematic Review of the Literature.Cureus · 2023Review
- Multi-Omics Strategies for Investigating the Microbiome in Toxicology Research.Toxicological sciences : an official journal of the Society of Toxicology · 2022Review
- Prediction of Smoking Habits From Class-Imbalanced Saliva Microbiome Data Using Data Augmentation and Machine Learning.Frontiers in microbiology · 2022Article
- Pyrosequencing and phenotypic microarray to decipher bacterial community variation inCurrent research in microbial sciences · 2021Article
- Intestinal flora alterations in patients with ulcerative colitis and their association with inflammation.Experimental and therapeutic medicine · 2021Article
- The Human Gut Microbiota: A Key Mediator of Osteoporosis and Osteogenesis.International journal of molecular sciences · 2021Review
- Bone Homeostasis and Gut Microbial-Dependent Signaling Pathways.Journal of microbiology and biotechnology · 2021Review
- Dysbiosis of gut microbiota in inflammatory bowel disease: Current therapies and potential for microbiota-modulating therapeutic approaches.Bosnian journal of basic medical sciences · 2021Review
- An Overview of Bioinformatics Tools for DNA Meta-Barcoding Analysis of Microbial Communities of Bioaerosols: Digest for Microbiologists.Life (Basel, Switzerland) · 2020Review
- An Integrated Multi-Disciplinary Perspectivefor Addressing Challenges of the Human Gut Microbiome.Metabolites · 2020Review
- Poor Unstable Midgut Microbiome of Hard Ticks Contrasts With Abundant and Stable Monospecific Microbiome in Ovaries.Frontiers in cellular and infection microbiology · 2020Article
- HMP16SData: Efficient Access to the Human Microbiome Project Through Bioconductor.American journal of epidemiology · 2019Article
- Effects of the long-term storage of human fecal microbiota samples collected in RNAlater.Scientific reports · 2019Article
- Whole rumen metagenome sequencing allows classifying and predicting feed efficiency and intake levels in cattle.Scientific reports · 2019Article
- In Silico and Experimental Evaluation of Primer Sets for Species-Level Resolution of the Vaginal Microbiota Using 16S Ribosomal RNA Gene Sequencing.The Journal of infectious diseases · 2019Article
- Citizen science charts two major "stomatotypes" in the oral microbiome of adolescents and reveals links with habits and drinking water composition.Microbiome · 2018Article
- Cow-to-mouse fecal transplantations suggest intestinal microbiome as one cause of mastitis.Microbiome · 2018Article
- Review
- Long-term treatment with green tea polyphenols modifies the gut microbiome of female sprague-dawley rats.The Journal of nutritional biochemistry · 2018Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
14 authors.
Curtis HuttenhowerDepartment of Biostatistics, Harvard School of Public Health, Boston, MA 02115, USA; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Rob KnightDepartment of Chemistry and Biochemistry, University of Colorado, Boulder, CO 80309, USA; BioFrontiers Institute, University of Colorado, Boulder, CO 80309, USA; HHMI, University of Colorado, Boulder, CO 80309, USA.
C Titus BrownDepartment of Microbiology and Molecular Genetics and Department of Computer Science and Engineering, Michigan State University, East Lansing, MI 48824, USA.
J Gregory CaporasoDepartment of Biological Sciences, Northern Arizona University, Flagstaff, AZ 86001, USA; Institute for Genomics and Systems Biology, Argonne National Laboratory, Argonne, IL 60439, USA.
Jose C ClementeDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA; Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.
Dirk GeversBioFrontiers Institute, University of Colorado, Boulder, CO 80309, USA.
Eric A FranzosaDepartment of Biostatistics, Harvard School of Public Health, Boston, MA 02115, USA.
Scott T KelleyDepartment of Biology, San Diego State University, San Diego, CA 92182, USA.
Dan KnightsDepartment of Computer Science and Engineering, University of Minnesota, Minneapolis, MN 55455, USA; Biotechnology Institute, University of Minnesota, Saint Paul, MN 55108, USA.
Ruth E LeyDepartment of Microbiology, Cornell University, Ithaca, NY 14853, USA.
Anup MahurkarInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD 21201, USA.
Jacques RavelInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD 21201, USA; Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD 21201, USA.
Scientists for Advancement of Microbiome Research
Owen WhiteInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD 21201, USA; Center for Health-Related Informatics and Bioimaging, University of Maryland School of Medicine, Baltimore, MD 21201, USA. Electronic address: owhite@som.umaryland.edu.
Funding
Large Scale Sequencing and Analysis of GenomesU54HG003067 · NHGRI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI GABRIEL, STACEY, LANDER, ERIC S · 2004 to 2015
$568.6MPilot & Feasibility ProgramP30DK043351 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI Ramnik J Xavier · 1991 to 2026
$35.3MA Quality Assurance, Coordination and Analysis Center for HMPU01HG004866 · NHGRI · UNIVERSITY OF MARYLAND BALTIMORE · PI WHITE, OWEN R · 2008 to 2012
$12.5MCharacterizing the gut microbial ecosystem for diagnosis and therapy in IBDU54DK102557 · NIDDK · BROAD INSTITUTE, INC. · PI HUTTENHOWER, CURTIS, XAVIER, RAMNIK J · 2014 to 2015
$7.7MDuration of Hormonal Contraceptive Use: Immune Responses & Vaginal MicrobiotaR01AI089878 · NIAID · JOHNS HOPKINS UNIVERSITY · PI GHANEM, KHALIL G · 2011 to 2015
$3.4MCharacterizing the gut microbial ecosystem for diagnosis and therapy in IBDU54DE023798 · NIDCR · BROAD INSTITUTE, INC. · PI HUTTENHOWER, CURTIS, XAVIER, RAMNIK J · 2013 to 2014
$3.0MInfluence of Modifiable Factors on the Vaginal Microbiota and Preterm BirthR01NR014826 · NINR · UNIVERSITY OF MARYLAND BALTIMORE · PI RAVEL, JACQUES, REGAN, MARY J · 2013 to 2017
$2.5MThe Microbial Ecology of Bacterial Vaginosis: A Fine Scale Resolution MetagenomicUH2AI083264 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI RAVEL, JACQUES · 2009 to 2011
$1.9MFunctional activity and inter-organismal interactions in the human microbiomeR01HG005969 · NHGRI · HARVARD SCHOOL OF PUBLIC HEALTH · PI HUTTENHOWER, CURTIS · 2010 to 2012
$1.3MGenetic regulationR01GM103604 · NIGMS · UNIVERSITY OF FLORIDA · PI PONCIANO, JOSE MIGUEL · 2013 to 2016
$947kCYTOTOXIC T CELLS IN MURINE S. TYPHIMURIUM INFECTIONF32AI008404 · NIAID · STANFORD UNIVERSITY · PI JONES, BRADLEY D · 1991 to 1993
–Howard Hughes Medical InstituteNHGRI NIH HHS R01HG005969NHGRI NIH HHS U01 HG004866NHGRI NIH HHS U54 HG003067NHGRI NIH HHS U54HG003067NIAID NIH HHS R01 AI089878NIAID NIH HHS R01AI089878NIAID NIH HHS U19AI08404NIAID NIH HHS UH2 AI083264NIAID NIH HHS UH2AI083264NIDCR NIH HHS U54 DE023798NIDCR NIH HHS U54DE023798NIDDK NIH HHS P30 DK043351NIDDK NIH HHS U54 DK102557NIGMS NIH HHS R01 GM103604NIGMS NIH HHS R01GM103604NINR NIH HHS R01 NR014826NINR NIH HHS R01NR014826
Abstract
The human microbiome has become a recognized factor in promoting and maintaining health. We outline opportunities in interdisciplinary research, analytical rigor, standardization, and policy development for this relatively new and rapidly developing field. Advances in these aspects of the research community may in turn advance our understanding of human microbiome biology.
Indexed as
Biomedical ResearchMicrobiotaAnimalsGuidelines as TopicHumansMicrobiological TechniquesNational Institutes of Health (U.S.)United States
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Read underepoch 390
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.