Evidence map›Paper›PMID 25301780›Full record

ArticleGenes & development2014

CPSF30 and Wdr33 directly bind to AAUAAA in mammalian mRNA 3' processing.

Serena L Chan, Ina Huppertz, Chengguo Yao, Lingjie Weng, James J Moresco, John R Yates, Jernej Ule, James L Manley, Yongsheng Shi

Abstract read
In one paragraph

Article in Genes & development, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 157 papers.

0numbers the graph read from it
0cells of the map it votes in
157citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

157 citing papers in PubMed.

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  12. FLL2 modulatesiScience · 2025
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  18. Review
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97 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Serena L ChanDepartment of Microbiology and Molecular Genetics, School of Medicine, University of California at Irvine, Irvine, California 92697, USA;
Ina HuppertzDepartment of Molecular Neuroscience, University College London Institute of Neurology, London WC1N 3BG, United Kingdom; Medical Research Council Laboratory of Molecular Biology, Cambridge CB2 0QH, United Kingdom;
Chengguo YaoDepartment of Microbiology and Molecular Genetics, School of Medicine, University of California at Irvine, Irvine, California 92697, USA;
Lingjie WengDepartment of Microbiology and Molecular Genetics, School of Medicine, University of California at Irvine, Irvine, California 92697, USA; Institute for Genomics and Bioinformatics, Department of Computer Science, University of California at Irvine Irvine, California 92697, USA;
James J MorescoDepartment of Chemical Physiology, The Scripps Research Institute, La Jolla, California 92037, USA;
John R YatesDepartment of Chemical Physiology, The Scripps Research Institute, La Jolla, California 92037, USA;
Jernej UleDepartment of Molecular Neuroscience, University College London Institute of Neurology, London WC1N 3BG, United Kingdom; Medical Research Council Laboratory of Molecular Biology, Cambridge CB2 0QH, United Kingdom;
James L ManleyDepartment of Biological Sciences, Columbia University, New York, New York 10027, USA.
Yongsheng ShiDepartment of Microbiology and Molecular Genetics, School of Medicine, University of California at Irvine, Irvine, California 92697, USA;

Funding

ZDS2P REGULATES SWE1P-DEPENDENT POLARIZED CELL GROWTH IN S CEREVISIAEP41RR011823 · NCRR · UNIVERSITY OF WASHINGTON · PI DAVIS, TRACY · 1996 to 2011
$24.7M
TrainingP41GM103533 · NIGMS · UNIVERSITY OF WASHINGTON · PI MACCOSS, MICHAEL · 2012 to 2021
$20.7M
MRNA SYTHESIS IN ANIMAL CELLS--3END FORMATIONR01GM028983 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI MANLEY, JAMES L. · 1985 to 2014
$6.4M
Characterization of the mammalian mRNA-3'-end processing complexR01GM090056 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI SHI, YONGSHENG · 2010 to 2022
$4.2M
HSRD VA CDP 12-186Medical Research Council MC_U105185858NCRR NIH HHS 5P41RR011823NCRR NIH HHS P41 RR011823NIGMS NIH HHS 8 P41 GM103533NIGMS NIH HHS GM090056NIGMS NIH HHS GM28983NIGMS NIH HHS P41 GM103533NIGMS NIH HHS R01 GM028983NIGMS NIH HHS R01 GM090056Wellcome Trust 089701
6 · The paper itself

Abstract

AAUAAA is the most highly conserved motif in eukaryotic mRNA polyadenylation sites and, in mammals, is specifically recognized by the multisubunit CPSF (cleavage and polyadenylation specificity factor) complex. Despite its critical functions in mRNA 3' end formation, the molecular basis for CPSF-AAUAAA interaction remains poorly defined. The CPSF subunit CPSF160 has been implicated in AAUAAA recognition, but direct evidence has been lacking. Using in vitro and in vivo assays, we unexpectedly found that CPSF subunits CPSF30 and Wdr33 directly contact AAUAAA. Importantly, the CPSF30-RNA interaction is essential for mRNA 3' processing and is primarily mediated by its zinc fingers 2 and 3, which are specifically targeted by the influenza protein NS1A to suppress host mRNA 3' processing. Our data suggest that AAUAAA recognition in mammalian mRNA 3' processing is more complex than previously thought and involves multiple protein-RNA interactions.

Indexed as

Amino Acid MotifsCleavage And Polyadenylation Specificity FactorGene Expression ProfilingHEK293 CellsHeLa CellsHumansNuclear ProteinsPolyadenylationProtein BindingProtein Structure, TertiaryRNA 3' End ProcessingRNA, MessengerCleavage And Polyadenylation Specificity FactorCPSF4 protein, humanNuclear ProteinsRNA, MessengerWDR33 protein, humancleavage and polyadenylationmRNA 3′ processingpolyadenylation signal

Identifiers

PMID25301780
PMCPMC4215182

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.