Evidence map›Paper›PMID 25299611›Full record

ArticlePLoS genetics2014

Targeted exon capture and sequencing in sporadic amyotrophic lateral sclerosis.

Julien Couthouis, Alya R Raphael, Roxana Daneshjou, Aaron D Gitler

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
4.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Genetics, Functions, and Clinical Impact of Presenilin-1 (PSEN1) Gene.International journal of molecular sciences · 2022
    Review
  7. Article
  8. Review
  9. Motoneuron Diseases.Advances in neurobiology · 2022
    Article
  10. Article
  11. RNA-Binding Proteins and the Complex Pathophysiology of ALS.International journal of molecular sciences · 2021
    Review
  12. Review
  13. Stress granule subtypes: an emerging link to neurodegeneration.Cellular and molecular life sciences : CMLS · 2020
    Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Neurotheranostics as personalized medicines.Advanced drug delivery reviews · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Julien CouthouisDepartment of Genetics, Stanford University School of Medicine, Stanford, California, United States of America.
Alya R RaphaelDepartment of Genetics, Stanford University School of Medicine, Stanford, California, United States of America.
Roxana DaneshjouDepartment of Genetics, Stanford University School of Medicine, Stanford, California, United States of America.
Aaron D GitlerDepartment of Genetics, Stanford University School of Medicine, Stanford, California, United States of America.
Stanford University · US

Funding

Molecular Basis of TDP-43 Proteinopathies: Disease Models and MechanismsR01NS065317 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI GITLER, AARON D. · 2009 to 2016
$2.7M
Ataxin-2 as a genetic risk factor for ALS: New insights into neurodegenerationR01NS073660 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI BONINI, NANCY M, GITLER, AARON D. · 2011 to 2015
$1.7M
NINDS NIH HHS NS065317NINDS NIH HHS NS07360NINDS NIH HHS R01 NS065317NINDS NIH HHS R01 NS073660
6 · The paper itself

Abstract

Amyotrophic lateral sclerosis (ALS) is a devastating neurodegenerative disease that results in progressive degeneration of motor neurons, ultimately leading to paralysis and death. Approximately 10% of ALS cases are familial, with the remaining 90% of cases being sporadic. Genetic studies in familial cases of ALS have been extremely informative in determining the causative mutations behind ALS, especially as the same mutations identified in familial ALS can also cause sporadic disease. However, the cause of ALS in approximately 30% of familial cases and in the majority of sporadic cases remains unknown. Sporadic ALS cases represent an underutilized resource for genetic information about ALS; therefore, we undertook a targeted sequencing approach of 169 known and candidate ALS disease genes in 242 sporadic ALS cases and 129 matched controls to try to identify novel variants linked to ALS. We found a significant enrichment in novel and rare variants in cases versus controls, indicating that we are likely identifying disease associated mutations. This study highlights the utility of next generation sequencing techniques combined with functional studies and rare variant analysis tools to provide insight into the genetic etiology of a heterogeneous sporadic disease.

Indexed as

ExonsAgedAged, 80 and overAmino Acid SequenceAmyotrophic Lateral SclerosisApolipoproteins EC9orf72 ProteinCase-Control StudiesDNA HelicasesFemaleGene FrequencyGenetic VariationGenome-Wide Association StudyGuanine Nucleotide Exchange FactorsHeterogeneous-Nuclear RibonucleoproteinsHumansALS2 protein, humanApolipoproteins EC9orf72 ProteinC9orf72 protein, humanDNA HelicasesFUS protein, humanGuanine Nucleotide Exchange FactorsHeterogeneous-Nuclear RibonucleoproteinsMultifunctional EnzymesProteinsRNA-Binding Protein FUSRNA HelicasesSETX protein, human

Identifiers

PMID25299611
PMCPMC4191946
OpenAlexW1998338379

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.