Evidence map›Paper›PMID 25299392›Full record

ArticlePLoS genetics2014

Cell-autonomous progeroid changes in conditional mouse models for repair endonuclease XPG deficiency.

Sander Barnhoorn, Lieneke M Uittenboogaard, Dick Jaarsma, Wilbert P Vermeij, Maria Tresini, Michael Weymaere, Hervé Menoni, Renata M C Brandt, Monique C de Waard, Sander M Botter and 6 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. YIPF2 regulates genome integrity.Cell & bioscience · 2024
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. "Bone-SASP" in Skeletal Aging.Calcified tissue international · 2023
    Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. DNA damage and repair in age-related inflammation.Nature reviews. Immunology · 2023
    Review
  19. Article
  20. XPG: a multitasking genome caretaker.Cellular and molecular life sciences : CMLS · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 3 countries.

Sander BarnhoornDepartment of Genetics, Erasmus University Medical Center, Rotterdam, The Netherlands.
Lieneke M UittenboogaardDepartment of Genetics, Erasmus University Medical Center, Rotterdam, The Netherlands.
Dick JaarsmaDepartment of Neuroscience, Erasmus University Medical Center, Rotterdam, The Netherlands.
Wilbert P VermeijDepartment of Genetics, Erasmus University Medical Center, Rotterdam, The Netherlands.
Maria TresiniDepartment of Genetics, Erasmus University Medical Center, Rotterdam, The Netherlands.
Michael WeymaereDepartment of Genetics, Erasmus University Medical Center, Rotterdam, The Netherlands.
Hervé MenoniDepartment of Genetics, Erasmus University Medical Center, Rotterdam, The Netherlands.
Renata M C BrandtDepartment of Genetics, Erasmus University Medical Center, Rotterdam, The Netherlands.
Monique C de WaardDepartment of Intensive Care, VU University Medical Center, Amsterdam, The Netherlands.
Sander M BotterUniklinik Balgrist, Zürich, Switzerland.
Altaf H SarkerLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.
Nicolaas G J JaspersDepartment of Genetics, Erasmus University Medical Center, Rotterdam, The Netherlands.
Gijsbertus T J van der HorstDepartment of Genetics, Erasmus University Medical Center, Rotterdam, The Netherlands.
Priscilla K CooperLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.
Jan H J HoeijmakersDepartment of Genetics, Erasmus University Medical Center, Rotterdam, The Netherlands.
Ingrid van der PluijmDepartment of Genetics, Erasmus University Medical Center, Rotterdam, The Netherlands; Department of Vascular Surgery, Erasmus University Medical Center, Rotterdam, The Netherlands.
Erasmus MC · NLLawrence Berkeley National Laboratory · USAmsterdam UMC Location VUmc · NLUniversitätsklinik Balgrist · CH

Funding

Transcription-Coupled & Replication-Associated Excision RepairP01CA092584 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI John A. Tainer · 2001 to 2026
$89.6M
THE IMPACT OF CELLULAR DEFENSE ON THE ROLE OF Ku80 IN GENOME MAINTENANCE AND LONGP01AG017242 · NIA · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI VIJG, JAN · 1999 to 2023
$46.1M
Models for DNA repair and cell cycle control variantsU01ES011044 · NIEHS · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI VIJG, JAN · 2001 to 2006
$5.1M
Mechanisms for Transcription-Coupled Repair in Human CellsR01CA063503 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI COOPER, PRISCILLA K. · 1994 to 2010
$3.9M
Novel Interactions of DNA Repair Processes in Replication Fork MaintenanceR01ES019935 · NIEHS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI COOPER, PRISCILLA K. · 2012 to 2016
$2.0M
NCI NIH HHS P01 CA092584NCI NIH HHS R01 CA063503NIA NIH HHS 1P01 AG-17242-02NIA NIH HHS P01 AG017242NIEHS NIH HHS 1UO1 ES011044NIEHS NIH HHS R01 ES019935NIEHS NIH HHS U01 ES011044
6 · The paper itself

Abstract

As part of the Nucleotide Excision Repair (NER) process, the endonuclease XPG is involved in repair of helix-distorting DNA lesions, but the protein has also been implicated in several other DNA repair systems, complicating genotype-phenotype relationship in XPG patients. Defects in XPG can cause either the cancer-prone condition xeroderma pigmentosum (XP) alone, or XP combined with the severe neurodevelopmental disorder Cockayne Syndrome (CS), or the infantile lethal cerebro-oculo-facio-skeletal (COFS) syndrome, characterized by dramatic growth failure, progressive neurodevelopmental abnormalities and greatly reduced life expectancy. Here, we present a novel (conditional) Xpg-/- mouse model which -in a C57BL6/FVB F1 hybrid genetic background- displays many progeroid features, including cessation of growth, loss of subcutaneous fat, kyphosis, osteoporosis, retinal photoreceptor loss, liver aging, extensive neurodegeneration, and a short lifespan of 4-5 months. We show that deletion of XPG specifically in the liver reproduces the progeroid features in the liver, yet abolishes the effect on growth or lifespan. In addition, specific XPG deletion in neurons and glia of the forebrain creates a progressive neurodegenerative phenotype that shows many characteristics of human XPG deficiency. Our findings therefore exclude that both the liver as well as the neurological phenotype are a secondary consequence of derailment in other cell types, organs or tissues (e.g. vascular abnormalities) and support a cell-autonomous origin caused by the DNA repair defect itself. In addition they allow the dissection of the complex aging process in tissue- and cell-type-specific components. Moreover, our data highlight the critical importance of genetic background in mouse aging studies, establish the Xpg-/- mouse as a valid model for the severe form of human XPG patients and segmental accelerated aging, and strengthen the link between DNA damage and aging.

Indexed as

AgingAnimalsBrainCachexiaCentral Nervous SystemDeficiency DiseasesDisease Models, AnimalDNA-Binding ProteinsDNA Excision Repair Protein ERCC-5DNA RepairEndonucleasesFemaleLiverLongevityMaleMice, Inbred C57BLDNA-Binding ProteinsDNA Excision Repair Protein ERCC-5EndonucleasesNuclear ProteinsTranscription Factors

Identifiers

PMID25299392
PMCPMC4191938
OpenAlexW2082248803

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.