Evidence map›Paper›PMID 25299332›Full record

ArticleCell host & microbe2014

Nucleocapsid phosphorylation and RNA helicase DDX1 recruitment enables coronavirus transition from discontinuous to continuous transcription.

Chia-Hsin Wu, Pei-Jer Chen, Shiou-Hwei Yeh

Abstract read
In one paragraph

Article in Cell host & microbe, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 146 papers.

0numbers the graph read from it
0cells of the map it votes in
146citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

146 citing papers in PubMed.

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  20. SARS-CoV-2 nucleocapsid protein directly prevents cGAS-DNA recognition through competitive binding.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article

86 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Chia-Hsin WuDepartment of Microbiology, National Taiwan University College of Medicine, No. 1, Jen-Ai Road, Section 1, Taipei 10051, Taiwan.
Pei-Jer ChenDepartment of Microbiology, National Taiwan University College of Medicine, No. 1, Jen-Ai Road, Section 1, Taipei 10051, Taiwan; Graduate Institute of Clinical Medicine, National Taiwan University College of Medicine, No. 1, Jen-Ai Road, Section 1, Taipei 10051, Taiwan; National Taiwan University Research Center for Medical Excellence, No. 2, Syu-Jhou Road, Taipei 10055, Taiwan.
Shiou-Hwei YehDepartment of Microbiology, National Taiwan University College of Medicine, No. 1, Jen-Ai Road, Section 1, Taipei 10051, Taiwan; National Taiwan University Research Center for Medical Excellence, No. 2, Syu-Jhou Road, Taipei 10055, Taiwan; Department of Laboratory Medicine, National Taiwan University Hospital, No. 1, Changde Street, Taipei 10048, Taiwan. Electronic address: shyeh@ntu.edu.tw.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Coronaviruses contain a positive-sense single-stranded genomic (g) RNA, which encodes nonstructural proteins. Several subgenomic mRNAs (sgmRNAs) encoding structural proteins are generated by template switching from the body transcription regulatory sequence (TRS) to the leader TRS. The process preferentially generates shorter sgmRNA. Appropriate readthrough of body TRSs is required to produce longer sgmRNAs and full-length gRNA. We find that phosphorylation of the viral nucleocapsid (N) by host glycogen synthase kinase-3 (GSK-3) is required for template switching. GSK-3 inhibition selectively reduces the generation of gRNA and longer sgmRNAs, but not shorter sgmRNAs. N phosphorylation allows recruitment of the RNA helicase DDX1 to the phosphorylated-N-containing complex, which facilitates template readthrough and enables longer sgmRNA synthesis. DDX1 knockdown or loss of helicase activity markedly reduces the levels of longer sgmRNAs. Thus, coronaviruses employ a unique strategy for the transition from discontinuous to continuous transcription to ensure balanced sgmRNAs and full-length gRNA synthesis.

Indexed as

Host-Pathogen InteractionsProtein Processing, Post-TranslationalTranscription, GeneticAnimalsCell LineCoronavirusCoronavirus Nucleocapsid ProteinsDEAD-box RNA HelicasesGlycogen Synthase Kinase 3MiceNucleocapsid ProteinsPhosphorylationProtein BindingRNA HelicasesRNA, MessengerRNA, ViralCoronavirus Nucleocapsid ProteinsDDX1 protein, mouseDEAD-box RNA HelicasesGlycogen Synthase Kinase 3Nucleocapsid ProteinsRNA HelicasesRNA, MessengerRNA, Viral

Identifiers

PMID25299332
PMCPMC7104987

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.