Evidence map›Paper›PMID 25299252›Full record

ArticlePLoS genetics2014

Role of STN1 and DNA polymerase α in telomere stability and genome-wide replication in Arabidopsis.

Elisa Derboven, Heinz Ekker, Branislav Kusenda, Petra Bulankova, Karel Riha

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Quantification of 8-International journal of molecular sciences · 2022
    Article
  3. Article
  4. Article
  5. Article
  6. A Mutation in DNA Polymerase α RescuesInternational journal of molecular sciences · 2021
    Article
  7. Roles of OB-Fold Proteins in Replication Stress.Frontiers in cell and developmental biology · 2020
    Review
  8. A high-quality sponge gourd (Horticulture research · 2020
    Article
  9. Plant DNA Polymerases.International journal of molecular sciences · 2019
    Review
  10. Review
  11. Article
  12. Review
  13. Emerging roles of CST in maintaining genome stability and human disease.Frontiers in bioscience (Landmark edition) · 2018
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Structure and function of the telomeric CST complex.Computational and structural biotechnology journal · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Elisa DerbovenGregor Mendel Institute, Austrian Academy of Sciences, Vienna, Austria.
Heinz EkkerCampus Science Support Facilities, Next Generation Sequencing Facility, Vienna, Austria.
Branislav KusendaGregor Mendel Institute, Austrian Academy of Sciences, Vienna, Austria.
Petra BulankovaGregor Mendel Institute, Austrian Academy of Sciences, Vienna, Austria.
Karel RihaGregor Mendel Institute, Austrian Academy of Sciences, Vienna, Austria; Central European Institute of Technology, Masaryk University, Brno, Czech Republic.
Gregor Mendel Institute of Molecular Plant Biology · ATAustrian Academy of Sciences · ATCampus Science Support Facilities · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The CST (Cdc13/CTC1-STN1-TEN1) complex was proposed to have evolved kingdom specific roles in telomere capping and replication. To shed light on its evolutionary conserved function, we examined the effect of STN1 dysfunction on telomere structure in plants. STN1 inactivation in Arabidopsis leads to a progressive loss of telomeric DNA and the onset of telomeric defects depends on the initial telomere size. While EXO1 aggravates defects associated with STN1 dysfunction, it does not contribute to the formation of long G-overhangs. Instead, these G-overhangs arise, at least partially, from telomerase-mediated telomere extension indicating a deficiency in C-strand fill-in synthesis. Analysis of hypomorphic DNA polymerase α mutants revealed that the impaired function of a general replication factor mimics the telomeric defects associated with CST dysfunction. Furthermore, we show that STN1-deficiency hinders re-replication of heterochromatic regions to a similar extent as polymerase α mutations. This comparative analysis of stn1 and pol α mutants suggests that STN1 plays a genome-wide role in DNA replication and that chromosome-end deprotection in stn1 mutants may represent a manifestation of aberrant replication through telomeres.

Indexed as

TelomereArabidopsisArabidopsis ProteinsCell Cycle ProteinsChromosomal Proteins, Non-HistoneDNA Polymerase IDNA ReplicationExodeoxyribonucleasesGenome, PlantHeterochromatinMutationTelomeraseArabidopsis ProteinsCell Cycle ProteinsChromosomal Proteins, Non-HistoneDNA Polymerase Iexodeoxyribonuclease IExodeoxyribonucleasesHeterochromatinSTN1 protein, ArabidopsisTelomeraseTERT protein, ArabidopsisXR5 protein, Arabidopsis

Identifiers

PMID25299252
PMCPMC4191939
OpenAlexW2087513660

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.