Evidence map›Paper›PMID 25298519›Full record

ArticleGenetics2014

Quantitative genetic analysis indicates natural selection on leaf phenotypes across wild tomato species (Solanum sect. Lycopersicon; Solanaceae).

Christopher D Muir, James B Pease, Leonie C Moyle

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
15.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
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  8. Leaf thickness of barley: genetic dissection, candidate genes prediction and its relationship with yield-related traits.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  9. Plant signaling & behavior · 2021
    Article
  10. Article
  11. Dissection of complex traits of tomato in the post-genome era.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Review
  12. High Photosynthetic Rates in aFrontiers in plant science · 2020
    Article
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  15. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Christopher D MuirBiodiversity Research Centre and Botany Department, University of British Columbia, Vancouver, British Columbia, Canada V6T 1Z4 Department of Biology, Indiana University, Bloomington, Indiana 47405 cdmuir@biodiversity.ubc.ca.ORCID http://orcid.org/0000-0003-2555-3878
James B PeaseDepartment of Biology, Indiana University, Bloomington, Indiana 47405.ORCID http://orcid.org/0000-0003-0125-9156
Leonie C MoyleDepartment of Biology, Indiana University, Bloomington, Indiana 47405.
Indiana University Bloomington · USUniversity of British Columbia · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Adaptive evolution requires both raw genetic material and an accessible path of high fitness from one fitness peak to another. In this study, we used an introgression line (IL) population to map quantitative trait loci (QTL) for leaf traits thought to be associated with adaptation to precipitation in wild tomatoes (Solanum sect. Lycopersicon; Solanaceae). A QTL sign test showed that several traits likely evolved under directional natural selection. Leaf traits correlated across species do not share a common genetic basis, consistent with a scenario in which selection maintains trait covariation unconstrained by pleiotropy or linkage disequilibrium. Two large effect QTL for stomatal distribution colocalized with key genes in the stomatal development pathway, suggesting promising candidates for the molecular bases of adaptation in these species. Furthermore, macroevolutionary transitions between vastly different stomatal distributions may not be constrained when such large-effect mutations are available. Finally, genetic correlations between stomatal traits measured in this study and data on carbon isotope discrimination from the same ILs support a functional hypothesis that the distribution of stomata affects the resistance to CO2 diffusion inside the leaf, a trait implicated in climatic adaptation in wild tomatoes. Along with evidence from previous comparative and experimental studies, this analysis indicates that leaf traits are an important component of climatic niche adaptation in wild tomatoes and demonstrates that some trait transitions between species could have involved few, large-effect genetic changes, allowing rapid responses to new environmental conditions.

Indexed as

Genetic Association StudiesPhenotypeQuantitative Trait LociSelection, GeneticBiological EvolutionChromosome MappingEvolution, MolecularGenetic TestingPlant LeavesQuantitative Trait, HeritableSolanum lycopersicumSpecies SpecificityadaptationleafQTLQTL sign testSolanum

Identifiers

PMID25298519
PMCPMC4256776
OpenAlexW2073809946

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.