Evidence map›Paper›PMID 25298419›Full record

ArticleInvestigative ophthalmology & visual science2014

Transethnic replication of association of CTG18.1 repeat expansion of TCF4 gene with Fuchs' corneal dystrophy in Chinese implies common causal variant.

Chao Xing, Xin Gong, Imran Hussain, Chiea-Chuen Khor, Donald T H Tan, Tin Aung, Jodhbir S Mehta, Eranga N Vithana, V Vinod Mootha

Open access · bronzeAbstract readComparative StudyMulticenter Study
In one paragraph

Article in Investigative ophthalmology & visual science, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed, 3 pooled it
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 3 syntheses or guidelines pooled it, 81 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Longitudinal Study ofMedical sciences (Basel, Switzerland) · 2026
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  12. New perspectives on DNA methylation modifications in ocular diseases.International journal of ophthalmology · 2025
    Review
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  14. Article
  15. Nanopore sequencing method for CTG18.1 expansion in TCF4 in late-onset Fuchs endothelial corneal dystrophy and a comparison of the structural features of cornea with first-degree relatives.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2024
    Article
  16. Targeting the ExpandedACS omega · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Chao XingUniversity of Texas Southwestern Medical Center, McDermott Center for Human Growth and Development/Center for Human Genetics, Dallas, Texas, United States.
Xin GongUniversity of Texas Southwestern Medical Center, Department of Ophthalmology, Dallas, Texas, United States.
Imran HussainUniversity of Texas Southwestern Medical Center, Department of Ophthalmology, Dallas, Texas, United States.
Chiea-Chuen KhorDivision of Human Genetics, Genome Institute of Singapore, Singapore.
Donald T H TanSingapore Eye Research Institute, Singapore.
Tin AungSingapore Eye Research Institute, Singapore.
Jodhbir S MehtaSingapore Eye Research Institute, Singapore.
Eranga N VithanaSingapore Eye Research Institute, Singapore Department of Ophthalmology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore Department of Neuroscience, Duke-NUS Graduate Medical School, Singapore.
V Vinod MoothaUniversity of Texas Southwestern Medical Center, McDermott Center for Human Growth and Development/Center for Human Genetics, Dallas, Texas, United States University of Texas Southwestern Medical Center, Department of Ophthalmology, Dallas, Texas, United States.
Singapore Eye Research Institute · SGThe University of Texas Southwestern Medical Center · USCenter for Human Genetics · USGenome Institute of Singapore · SG

Funding

Laying a Foundation for Precision Medicine for Fuchs' DystrophyR01EY022161 · NEI · UT SOUTHWESTERN MEDICAL CENTER · PI MOOTHA, VENKATESWARA VINOD · 2012 to 2024
$4.8M
Core Grant for Vision ResearchP30EY020799 · NEI · UT SOUTHWESTERN MEDICAL CENTER · PI NIEDERKORN, JERRY · 2010 to 2016
$4.1M
NEI NIH HHS P30 EY020799NEI NIH HHS P30EY020799NEI NIH HHS R01 EY022161NEI NIH HHS R01EY022161
6 · The paper itself

Abstract

purposeTo test the association between the CTG18.1 trinucleotide repeat expansion of TCF4 gene and Fuchs' endothelial corneal dystrophy (FECD) in a Chinese population.

methodsThe trinucleotide repeat polymorphism CTG18.1 was genotyped using short tandem repeat and triplet repeat primed polymerase chain reaction assays in 57 Chinese subjects with FECD and 121 controls. Statistical association of the expanded CTG18.1 allele and 18 single nucleotide polymorphisms (SNPs) across TCF4 with FECD was evaluated. To investigate the linkage disequilibrium structure of the TCF4 region, haplotype analysis was performed on our study subjects and compared with genotyping data of 97 Han Chinese and 85 Caucasians in the 1000 Genomes Project.

resultsThe expanded CTG18.1 allele was associated with FECD (P = 4.7 × 10(-14)), with the odds ratio of each copy of the expanded allele estimated to be 66.5 (95% confidence interval: 12.6-350.1). Five TCF4 SNPs showed association with FECD at a nominal level (P < 5.0 × 10(-2)); however, conditional on the expanded CTG18.1 polymorphism, none of the SNPs showed association with FECD. The only haplotype associated with the disease was the one with the expansion at the CTG18.1 locus.

conclusionsTransethnic replication of the association between the CTG18.1 repeat expansion in the TCF4 gene and FECD suggests it is a common, causal variant shared in Eurasian populations conferring significant risk for the development of FECD. Our data suggest that the expanded CTG18.1 allele is the main, if not sole, causal variant at this gene locus in the Chinese population.

Indexed as

DNA ReplicationGenetic Predisposition to DiseasePolymorphism, GeneticAgedAllelesAsian PeopleBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsFemaleFuchs' Endothelial DystrophyGenotypeHaplotypesHumansIncidenceLinkage DisequilibriumMaleMicrosatellite RepeatsBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsTCF4 protein, humanTranscription Factor 4Transcription FactorsCTG18.1 trinucleotide repeatFuchs' corneal dystrophygenetic diseasesTCF4

Identifiers

PMID25298419
PMCPMC4224583
OpenAlexW2333735134

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.