Evidence map›Paper›PMID 25298040›Full record

ArticleGene therapy2015

APOBEC3A catabolism of electroporated plasmid DNA in mouse muscle.

A Kostrzak, M Henry, P L Demoyen, S Wain-Hobson, J-P Vartanian

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Gene therapy, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

A KostrzakInvectys, Pasteur BioTop, Institut Pasteur, CNRS URA 3015, France.
M HenryMolecular Retrovirology Unit, Institut Pasteur, CNRS URA 3015, France.
P L DemoyenInvectys, Pasteur BioTop, Institut Pasteur, CNRS URA 3015, France.
S Wain-Hobson1] Invectys, Pasteur BioTop, Institut Pasteur, CNRS URA 3015, France [2] Molecular Retrovirology Unit, Institut Pasteur, CNRS URA 3015, France.
J-P VartanianMolecular Retrovirology Unit, Institut Pasteur, CNRS URA 3015, France.
Institut Pasteur · FRCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The mouse is widely used as a model for DNA therapy and vaccination even though the efficiency of DNA delivery in higher mammals and humans is much less. The human APOBEC3 (A3) enzymes impact viral genomes by cytidine deamination, which introduces multiple uridine residues into single-stranded DNA, a process known as genetic editing. This initiates rapid DNA catabolism via a uracil DNA glycosylase dependent pathway. In tissue culture, A3A, A3C and A3B can hyperedit transfected plasmid DNA. We explored plasmid catabolism in vivo initiated by A3A, the most efficient of the human enzymes and one that is functionally conserved across most mammals. As rodents do not encode an A3A enzyme, it was possible to explore DNA degradation in the mouse model. Human A3A genetically edits co-electroporated luciferase plasmid DNA in mouse skeletal muscle that initiates DNA degradation resulting in approximately fourfold decrease in bioluminescence. Part of the degradation occurs in the nucleus as indicated by complex hyperedited DNA molecules. As human A3A is strongly upregulated by interferon α and DNA sensing pathways, it is a strong candidate enzyme for restricting plasmid DNA in higher mammals.

Indexed as

AnimalsBase SequenceCell LineCell NucleusCytidine DeaminaseDNA CleavageDNA, MitochondrialElectron Transport Complex IVElectroporationFemaleGenes, ReporterLuciferasesMice, Inbred BALB CMolecular Sequence DataMuscle, SkeletalMutationAPOBEC3A protein, humanCytidine DeaminaseDNA, MitochondrialElectron Transport Complex IVLuciferasesProteins

Identifiers

PMID25298040
OpenAlexW2089397162

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.