Evidence map›Paper›PMID 25297078›Full record

ArticleDong wu xue yan jiu = Zoological research2014

Molecular cloning, sequence analysis, and cadmium stress-rated expression changes of BTG1 in freshwater pearl mussel (Hyriopsis schlegelii).

Kou Peng, Cheng-Yuan Wang, Jun-Hua Wang, Jun-Qing Sheng, Jian-Wu Shi, Jian Li, Yi-Jiang Hong

Open access · greenAbstract read
In one paragraph

Article in Dong wu xue yan jiu = Zoological research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Complete F mitochondrial genomes of the Biwa pearl mussel,Mitochondrial DNA. Part B, Resources · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Kou PengSchool of Life Sciences and Food Engineering, Nanchang University, Nanchang 330031, China.
Cheng-Yuan WangSchool of Life Sciences and Food Engineering, Nanchang University, Nanchang 330031, China.
Jun-Hua WangSchool of Life Sciences and Food Engineering, Nanchang University, Nanchang 330031, China.
Jun-Qing ShengSchool of Life Sciences and Food Engineering, Nanchang University, Nanchang 330031, China.
Jian-Wu ShiSchool of Life Sciences and Food Engineering, Nanchang University, Nanchang 330031, China.
Jian LiSchool of Life Sciences and Food Engineering, Nanchang University, Nanchang 330031, China.
Yi-Jiang HongSchool of Life Sciences and Food Engineering, Nanchang University, Nanchang 330031, China; Institute of Life Science, Nanchang University, Nanchang 330031, China. yijianghong@126.com.
Nanchang University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The B cells translocation gene 1 (BTG1) is a member of the BTG/TOB family of anti-proliferative genes, which have recently emerged as important regulators of cell growth and differentiation among verteates. Here, for the first time we cloned the full-length cDNA sequence of Hyriopsis schlegelii (Hs-BTG1), an economically important freshwater shellfish and potential indicator of environmental heavy metal pollution, for the first time. Using rapid amplification of cDNA ends (RACE) together with splicing the EST sequence from a haemocyte cDNA liary, we found that Hs-BTG1 contains a 525 bp open reading frame (ORF) encoding a 174 amino-acid polypeptide, a 306 bp 5' untranslated region (5' UTR), and a 571 bp 3' UTR with a Poly(A) tail as well as a transcription termination signal (AATAAA). Homologue searching against GenBank revealed that Hs-BTG1 was closest to Crassostrea gigas BTG1, sharing 50.57% of protein identities. Hs-BTG1 also shares some typical features of the BTG/TOB family, possessing two well-conserved A and B boxes. Clustering analysis of Hs-BTG1 and other known BTGs showed that Hs-BTG1 was also closely related to BTG1 of C. gigas from the inverteate BTG1 clade. Function prediction via homology modeling showed that both Hs-BTG1 and C. gigas BTG1 share a similar three-dimensional structure with Homo sapiens BTG1. Tissue-specific expression analysis of the Hs-BTG1 via real-time PCR showed that the transcripts were constitutively expressed, with the highest levels in the hepatopancreas and gills, and the lowest in both haemocyte and muscle tissue. Expression levels of Hs-BTG1 in hepatopancreas (2.03-fold), mantle (2.07-fold), kidney (2.2-fold) and haemocyte (2.5-fold) were enhanced by cadmium (Cd²⁺) stress, suggesting that Hs-BTG1 may have played a significant role in H. schlegelii adaptation to adverse environmental conditions.

Indexed as

Cloning, MolecularAmino Acid SequenceAnimalsBase SequenceBivalviaCadmiumGene Expression RegulationModels, MolecularMolecular Sequence DataNeoplasm ProteinsPhylogenyProtein ConformationRNA, MessengerCadmiumNeoplasm ProteinsRNA, MessengerBTG1Cadmium stressGene cloningHyriopsis schlegeliimRNA expression

Identifiers

PMID25297078
PMCPMC4790355
OpenAlexW2258791215

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.