Evidence map›Paper›PMID 25296752›Full record

ArticleThe Journal of biological chemistry2014

Feedback induction of a photoreceptor-specific isoform of retinoid-related orphan nuclear receptor β by the rod transcription factor NRL.

Yulong Fu, Hong Liu, Lily Ng, Jung-Woong Kim, Hong Hao, Anand Swaroop, Douglas Forrest

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Patterning and Development of Photoreceptors in the Human Retina.Frontiers in cell and developmental biology · 2022
    Review
  7. Article
  8. ROR: Nuclear Receptor for Melatonin or Not?Molecules (Basel, Switzerland) · 2021
    Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Photoreceptor cell fate specification in vertebrates.Development (Cambridge, England) · 2015
    Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Yulong FuFrom the Laboratory of Endocrinology and Receptor Biology, NIDDK, and.
Hong LiuFrom the Laboratory of Endocrinology and Receptor Biology, NIDDK, and.
Lily NgFrom the Laboratory of Endocrinology and Receptor Biology, NIDDK, and.
Jung-Woong KimNeurobiology-Neurodegeneration and Repair Laboratory, NEI, National Institutes of Health, Bethesda, Maryland 20892.
Hong HaoNeurobiology-Neurodegeneration and Repair Laboratory, NEI, National Institutes of Health, Bethesda, Maryland 20892.
Anand SwaroopNeurobiology-Neurodegeneration and Repair Laboratory, NEI, National Institutes of Health, Bethesda, Maryland 20892.
Douglas ForrestFrom the Laboratory of Endocrinology and Receptor Biology, NIDDK, and forrestd@niddk.nih.gov.
National Institutes of Health · US

Funding

Regulation of retinal developmentZIAEY000450 · NEI · NATIONAL EYE INSTITUTE · PI SWAROOP, ANAND · 2009 to 2025
$71.0M
Orphan nuclear receptors and mammalian developmentZIADK047035 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI FORREST, DOUGLAS · 2009 to 2025
$8.6M
Intramural NIH HHS
6 · The paper itself

Abstract

Vision requires the generation of cone and rod photoreceptors that function in daylight and dim light, respectively. The neural retina leucine zipper factor (NRL) transcription factor critically controls photoreceptor fates as it stimulates rod differentiation and suppresses cone differentiation. However, the controls over NRL induction that balance rod and cone fates remain unclear. We have reported previously that the retinoid-related orphan receptor β gene (Rorb) is required for Nrl expression and other retinal functions. We show that Rorb differentially expresses two isoforms: RORβ2 in photoreceptors and RORβ1 in photoreceptors, progenitor cells, and other cell types. Deletion of RORβ2 or RORβ1 increased the cone:rod ratio ∼2-fold, whereas deletion of both isoforms in Rorb(-/-) mice produced almost exclusively cone-like cells at the expense of rods, suggesting that both isoforms induce Nrl. Electroporation of either RORβ isoform into retinal explants from Rorb(-/-) neonates reactivated Nrl and rod genes but, in Nrl(-/-) explants, failed to reactivate rod genes, indicating that NRL is the effector for both RORβ isoforms in rod differentiation. Unexpectedly, RORβ2 expression was lost in Nrl(-/-) mice. Moreover, NRL activated the RORβ2-specific promoter of Rorb, indicating that NRL activates Rorb, its own inducer gene. We suggest that feedback activation between Nrl and Rorb genes reinforces the commitment to rod differentiation.

Indexed as

AnimalsAnimals, NewbornBasic-Leucine Zipper Transcription FactorsBlotting, WesternCell DifferentiationEye ProteinsFeedback, PhysiologicalGene Expression Regulation, DevelopmentalIn Situ HybridizationMice, KnockoutMicroscopy, ConfocalNuclear Receptor Subfamily 1, Group F, Member 2OpsinsPhotoreceptor Cells, VertebratePromoter Regions, GeneticProtein IsoformsBasic-Leucine Zipper Transcription FactorsEye ProteinsNrl protein, mouseNuclear Receptor Subfamily 1, Group F, Member 2OpsinsProtein IsoformsCell DifferentiationNeurodevelopmentPhotoreceptorRetinaTranscription Factor

Identifiers

PMID25296752
PMCPMC4239602
OpenAlexW2039264033

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.