Evidence map›Paper›PMID 25294881›Full record

ArticleThe Journal of biological chemistry2014

The CpxR/CpxA two-component regulatory system up-regulates the multidrug resistance cascade to facilitate Escherichia coli resistance to a model antimicrobial peptide.

Natasha Weatherspoon-Griffin, Dezhi Yang, Wei Kong, Zichun Hua, Yixin Shi

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 126 citations in OpenAlex.

  1. Indole decreases the virulence of enterotoxigenic Escherichia coli.World journal of microbiology & biotechnology · 2026
    Article
  2. Article
  3. Article
  4. ThemBio · 2026
    Article
  5. Review
  6. Article
  7. Article
  8. A Designed ZnJournal of the American Chemical Society · 2025
    Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Roles of DJ41_1407 and DJ41_1408 inInternational journal of molecular sciences · 2024
    Article
  15. Journal of veterinary science · 2024
    Article
  16. Cpx-signalling innpj antimicrobials and resistance · 2024
    Article
  17. Article
  18. Article
  19. Article
  20. Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Natasha Weatherspoon-GriffinFrom The School of Life Sciences.
Dezhi Yangthe College of Life Sciences, Inner Mongolia University, Hohhot, Inner Mongolia 010021, China, and From The School of Life Sciences, The Center for Infectious Diseases and Vaccinology at the Biodesign Institute, Arizona State University, Tempe, Arizona, 85287-4501.
Wei KongThe Center for Infectious Diseases and Vaccinology at the Biodesign Institute, Arizona State University, Tempe, Arizona, 85287-4501.
Zichun HuaThe State Key Laboratory of Pharmaceutical Biotechnology, Nanjing University, Nanjing, Jiangsu, 210093, China.
Yixin ShiFrom The School of Life Sciences, The Center for Infectious Diseases and Vaccinology at the Biodesign Institute, Arizona State University, Tempe, Arizona, 85287-4501, yixin.shi@asu.edu.
Arizona State University · USInner Mongolia University · CNNanjing University · CN

Funding

Graduate and Undergraduate Training in Biomedicine at ASUR25GM099650 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI NEWFELD, STUART J · 2012 to 2015
$2.2M
NIGMS NIH HHS R25 GM099650
6 · The paper itself

Abstract

A genome-wide susceptibility assay was used to identify specific CpxR-dependent genes that facilitate Escherichia coli resistance to a model cationic antimicrobial peptide, protamine. A total of 115 strains from the Keio Collection, each of which contained a deletion at a demonstrated or predicted CpxR/CpxA-dependent locus, were tested for protamine susceptibility. One strain that exhibited high susceptibility carried a deletion of tolC, a gene that encodes the outer membrane component of multiple tripartite multidrug transporters. Concomitantly, two of these efflux systems, AcrAB/TolC and EmrAB/TolC, play major roles in protamine resistance. Activation of the CpxR/CpxA system stimulates mar transcription, suggesting a new regulatory circuit that enhances the multidrug resistance cascade. Tripartite multidrug efflux systems contribute to bacterial resistance to protamine differently from the Tat system. DNase I footprinting analysis demonstrated that the CpxR protein binds to a sequence located in the -35 and -10 regions of mar promoter. This sequence resembles the consensus CpxR binding site, however, on the opposite strand. aroK, a CpxR-dependent gene that encodes a shikimate kinase in the tryptophan biosynthesis pathway, was also found to facilitate protamine resistance. Specific aromatic metabolites from this pathway, such as indole, can stimulate expression of well studied CpxR-dependent genes degP and cpxP, which are not components of the tripartite multidrug transporters. Thus, we propose a novel mechanism for E. coli to modulate resistance to protamine and likely other cationic antimicrobial peptides in which the CpxR/CpxA system up-regulates mar transcription in response to specific aromatic metabolites, subsequently stimulating the multidrug resistance cascade.

Indexed as

Drug Resistance, Multiple, BacterialAntimicrobial Cationic PeptidesBacterial Outer Membrane ProteinsBacterial ProteinsDNA-Binding ProteinsEscherichia coliEscherichia coli ProteinsGene Expression Regulation, BacterialMembrane Transport ProteinsMicrobial ViabilityModels, GeneticMutationPhosphotransferases (Alcohol Group Acceptor)Promoter Regions, GeneticProtaminesProtein BindingAntimicrobial Cationic PeptidesBacterial Outer Membrane ProteinsBacterial ProteinsCpxA protein, E coliCpxR protein, BacteriaDNA-Binding ProteinsEscherichia coli ProteinsMarA protein, E coliMarR protein, E coliMembrane Transport ProteinsPhosphotransferases (Alcohol Group Acceptor)ProtaminesProtein KinasesRepressor Proteinsshikimate kinasetolC protein, E coliBacterial Signal TransductionCpxR BoxMultidrug TransporterThe CpxR/CpxA Two-Component SystemThe mar OperonTranscription FactorTranscription PromoterTranscription Regulation

Identifiers

PMID25294881
PMCPMC4239611
OpenAlexW2077721821

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.