Evidence map›Paper›PMID 25294830›Full record

ArticleNucleic acids research2014

Structural requirement of Ntc77 for spliceosome activation and first catalytic step.

Hsin-Chou Chen, Kae-Jiun Chang, Yu-Lun Su, Yu-Hsin Huang, Soo-Chen Cheng

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Hsin-Chou ChenInstitute of Molecular Biology, Academia Sinica, Nankang, Taipei, Taiwan 115, Republic of China Institute of Microbiology and Immunology, National Yang-Ming University, Shih-Pai, Taipei, Taiwan 112, Republic of China.
Kae-Jiun ChangInstitute of Molecular Biology, Academia Sinica, Nankang, Taipei, Taiwan 115, Republic of China.
Yu-Lun SuInstitute of Molecular Biology, Academia Sinica, Nankang, Taipei, Taiwan 115, Republic of China.
Yu-Hsin HuangInstitute of Molecular Biology, Academia Sinica, Nankang, Taipei, Taiwan 115, Republic of China.
Soo-Chen ChengInstitute of Molecular Biology, Academia Sinica, Nankang, Taipei, Taiwan 115, Republic of China mbscc@ccvax.sinica.edu.tw.
Institute of Molecular Biology, Academia Sinica · TWBeijing Chao-Yang Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Prp19-associated complex is required for spliceosome activation by stabilizing the binding of U5 and U6 on the spliceosome after the release of U4. The complex comprises at least eight proteins, among which Ntc90 and Ntc77 contain multiple tetratricopeptide repeat (TPR) elements. We have previously shown that Ntc90 is not involved in spliceosome activation, but is required for the recruitment of essential first-step factor Yju2 to the spliceosome. We demonstrate here that Ntc77 has dual functions in both spliceosome activation and the first catalytic step in recruiting Yju2. We have identified an amino-terminal region of Ntc77, which encompasses the N-terminal domain and the first three TPR motifs, dispensable for spliceosome activation but required for stable interaction of Yju2 with the spliceosome. Deletion of this region had no severe effect on the integrity of the NTC, binding of NTC to the spliceosome or spliceosome activation, but impaired splicing and exhibited a dominant-negative growth phenotype. Our data reveal functional roles of Ntc77 in both spliceosome activation and the first catalytic step, and distinct structural domains of Ntc77 required for these two steps.

Indexed as

BiocatalysisCell Cycle ProteinsDEAD-box RNA HelicasesNuclear ProteinsProtein Structure, TertiaryRNA Splicing FactorsSaccharomyces cerevisiae ProteinsSpliceosomesCell Cycle ProteinsCLF1 protein, S cerevisiaeDEAD-box RNA HelicasesNuclear ProteinsPRP19 protein, S cerevisiaePRP2 protein, S cerevisiaeRNA Splicing FactorsSaccharomyces cerevisiae ProteinsSyf1 protein, S cerevisiaeYJU2 protein, S cerevisiae

Identifiers

PMID25294830
PMCPMC4231770
OpenAlexW2150256021

What OpenQuestion holds

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.