Evidence map›Paper›PMID 25293366›Full record

ArticleThe Journal of infectious diseases2015

Evidence for clonal expansion after antibiotic selection pressure: pneumococcal multilocus sequence types before and after mass azithromycin treatments.

Jeremy D Keenan, Keith P Klugman, Lesley McGee, Jorge E Vidal, Sopio Chochua, Paulina Hawkins, Vicky Cevallos, Teshome Gebre, Zerihun Tadesse, Paul M Emerson and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 48 citations in OpenAlex.

  1. Review
  2. Multiple Independent Origins of TnAntibiotics (Basel, Switzerland) · 2026
    Article
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  9. Impact of previous macrolide use on invasive pneumococcal disease due to erythromycin-resistant serotypes in adults over 59 years of age.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2022
    Article
  10. Article
  11. Mass drug administration with azithromycin for trachoma elimination and the population structure of Streptococcus pneumoniae in the nasopharynx.Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases · 2021
    Article
  12. Article
  13. Antimicrobial Resistance Following Azithromycin Mass Drug Administration: Potential Surveillance Strategies to Assess Public Health Impact.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2020
    Article
  14. Article
  15. Article
  16. Article
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  18. Article
  19. Macrolide Resistance inFrontiers in cellular and infection microbiology · 2016
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 3 countries.

Jeremy D KeenanFrancis I Proctor Foundation Department of Ophthalmology, University of California, San Francisco.
Keith P KlugmanHubert Department of Global Health, Rollins School of Public Health, Emory University.
Lesley McGeeRespiratory Diseases Branch, Centers for Disease Control and Prevention.
Jorge E VidalHubert Department of Global Health, Rollins School of Public Health, Emory University.
Sopio ChochuaHubert Department of Global Health, Rollins School of Public Health, Emory University Respiratory Diseases Branch, Centers for Disease Control and Prevention.
Paulina HawkinsHubert Department of Global Health, Rollins School of Public Health, Emory University Respiratory Diseases Branch, Centers for Disease Control and Prevention.
Vicky CevallosFrancis I Proctor Foundation.
Teshome GebreThe Carter Center, Addis Ababa, Ethiopia.
Zerihun TadesseThe Carter Center, Addis Ababa, Ethiopia.
Paul M EmersonThe Carter Center, Atlanta, Georgia.
James H JorgensenUniversity of Texas Health Sciences Center, San Antonio.
Bruce D GaynorFrancis I Proctor Foundation Department of Ophthalmology, University of California, San Francisco.
Thomas M LietmanFrancis I Proctor Foundation Department of Ophthalmology, University of California, San Francisco.
Emory University · USUniversity of California, San Francisco · USThe Carter Center · ETCarter Center · USCenters for Disease Control and Prevention · UGThe University of Texas Health Science Center at San Antonio · US

Funding

CTSA: K12 COMPONENTKL2RR024130 · NCRR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI JOHNSTON, S. CLAIBORNE · 2006 to 2011
$19.3M
TANA IIU10EY016214 · NEI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LIETMAN, THOMAS M · 2004 to 2013
$4.4M
Optimal trachoma control after mass antibiotic distributionsK23EY019071 · NEI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KEENAN, JEREMY DAVID · 2008 to 2012
$982k
NCRR NIH HHS KL2 RR024130NCRR NIH HHS KL2RR024130NEI NIH HHS K23 EY019071NEI NIH HHS K23EY019071NEI NIH HHS U10 EY016214Wellcome Trust
6 · The paper itself

Abstract

backgroundA clinical trial of mass azithromycin distributions for trachoma created a convenient experiment to test the hypothesis that antibiotic use selects for clonal expansion of preexisting resistant bacterial strains.

methodsTwelve communities in Ethiopia received mass azithromycin distributions every 3 months for 1 year. A random sample of 10 children aged 0-9 years from each community was monitored by means of nasopharyngeal swab sampling before mass azithromycin distribution and after 4 mass treatments. Swab specimens were tested for Streptococcus pneumoniae, and isolates underwent multilocus sequence typing.

resultsOf 82 pneumococcal isolates identified before treatment, 4 (5%) exhibited azithromycin resistance, representing 3 different sequence types (STs): 177, 6449, and 6494. The proportion of isolates that were classified as one of these 3 STs and were resistant to azithromycin increased after 4 mass azithromycin treatments (14 of 96 isolates [15%]; P = .04). Using a classification index, we found evidence for a relationship between ST and macrolide resistance after mass treatments (P < .0001). The diversity of STs-as calculated by the unbiased Simpson index-decreased significantly after mass azithromycin treatment (P = .045).

conclusionsResistant clones present before mass azithromycin treatments increased in frequency after treatment, consistent with the theory that antibiotic selection pressure results in clonal expansion of existing resistant strains.

Indexed as

Anti-Bacterial AgentsAzithromycinChildChild, PreschoolDrug Resistance, BacterialFemaleGenes, BacterialHumansInfantInfant, NewbornMaleMultilocus Sequence TypingNasal CavityPneumococcal InfectionsStreptococcus pneumoniaeAnti-Bacterial AgentsAzithromycinAfricaclonal expansionMLSTmultilocus sequence typingStreptococcus pneumoniae

Identifiers

PMID25293366
PMCPMC4416126
OpenAlexW2083908622

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.