Evidence map›Paper›PMID 25290445›Full record

ArticlePloS one2014

Locational diversity of alpha satellite DNA and intergeneric hybridization aspects in the Nomascus and Hylobates genera of small apes.

Sudarath Baicharoen, Takako Miyabe-Nishiwaki, Visit Arsaithamkul, Yuriko Hirai, Kwanruen Duangsa-ard, Boripat Siriaroonrat, Hiroshi Domae, Kornsorn Srikulnath, Akihiko Koga, Hirohisa Hirai

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In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Sudarath BaicharoenBioscience Program, Faculty of Science, Kasetsart University, Bangkok, Thailand; Center for Advanced Studies in Tropical Natural Resources, National Research University-Kasetsart University, Bangkok, Thailand; Conservation, Research and Education Division, Zoological Park Organization, Bangkok, Thailand.
Takako Miyabe-NishiwakiPrimate Research Institute, Kyoto University, Inuyama, Aichi, Japan.
Visit ArsaithamkulConservation, Research and Education Division, Zoological Park Organization, Bangkok, Thailand.
Yuriko HiraiPrimate Research Institute, Kyoto University, Inuyama, Aichi, Japan.
Kwanruen Duangsa-ardChiang Mai Zoo, Chiang Mai, Thailand.
Boripat SiriaroonratConservation, Research and Education Division, Zoological Park Organization, Bangkok, Thailand.
Hiroshi DomaeIshikawa Zoo, Tokusan-machi, Noumi, Ishikawa, Japan.
Kornsorn SrikulnathCenter for Advanced Studies in Tropical Natural Resources, National Research University-Kasetsart University, Bangkok, Thailand; Department of Genetics, Faculty of Science, Kasetsart University, Bangkok, Thailand.
Akihiko KogaPrimate Research Institute, Kyoto University, Inuyama, Aichi, Japan.
Hirohisa HiraiPrimate Research Institute, Kyoto University, Inuyama, Aichi, Japan.
Kyoto University · JPKasetsart University · THZoological Park Organization · THTokiwa Park · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recently, we discovered that alpha satellite DNA has unique and genus-specific localizations on the chromosomes of small apes. This study describes the details of alpha satellite localization in the genera Nomascus and Hylobates and explores their usefulness in distinguishing parental genome sets in hybrids between these genera. Fluorescence in situ hybridization was used to establish diagnostic criteria of alpha satellite DNA markers in discriminating small ape genomes. In particular we established the genus specificity of alpha satellite distribution in three species of light-cheeked gibbons (Nomascus leucogenys, N. siki, and N. gabriellae) in comparison to that of Hylobates lar. Then we determined the localization of alpha satellite DNA in a hybrid individual which resulted from a cross between these two genera. In Nomascus the alpha satellite DNA blocks were located at the centromere, telomere, and four interstitial regions. In Hylobates detectable amounts of alpha satellite DNA were seen only at centromeric regions. The differences in alpha satellite DNA locations between Nomascus and Hylobates allowed us to easily distinguish the parental chromosomal sets in the genome of intergeneric hybrid individuals found in Thai and Japanese zoos. Our study illustrates how molecular cytogenetic markers can serve as diagnostic tools to identify the origin of individuals. These molecular tools can aid zoos, captive breeding programs and conservation efforts in managing small apes species. Discovering more information on alpha satellite distribution is also an opportunity to examine phylogenetic and evolutionary questions that are still controversial in small apes.

Indexed as

Chromosomes, MammalianDNA, SatelliteHybridization, GeneticAnimalsChromosome MappingChromosome PaintingFemaleHumansHylobatesIn Situ Hybridization, FluorescenceKaryotypingMalePhylogenyDNA, Satellite

Identifiers

PMID25290445
PMCPMC4188616
OpenAlexW2021794036

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.