Evidence map›Paper›PMID 25288994›Full record

ArticleThe plant pathology journal2014

Genetic Diversity of Pectobacterium carotovorum subsp. brasiliensis Isolated in Korea.

Dong Hwan Lee, Jin-Beom Kim, Jeong-A Lim, Sang-Wook Han, Sunggi Heu

Abstract read
In one paragraph

Article in The plant pathology journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Microorganisms · 2021
    Review
  8. Origin and Evolution ofMicroorganisms · 2020
    Article
  9. Distribution ofThe plant pathology journal · 2020
    Article
  10. Article
  11. Colanic Acid Is a Novel Phage Receptor ofFrontiers in microbiology · 2019
    Article
  12. Article
  13. Bacteriophages and Bacterial Plant Diseases.Frontiers in microbiology · 2017
    Review
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Dong Hwan LeeDivision of Microbial Safety, National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, Korea.
Jin-Beom KimDivision of Microbial Safety, National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, Korea.
Jeong-A LimDivision of Microbial Safety, National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, Korea.
Sang-Wook HanDepartment of Integrative Plant Science, Chung-Ang University, Anseong 456-756, Korea.
Sunggi HeuDivision of Microbial Safety, National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, Korea.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The plant pathogenic bacterial genus Pectobacteirum consists of heterogeneous strains. The P. carotovorum species is a complex strain showing divergent characteristics, and a new subspecies named P. carotovorum subsp. brasiliensis has been identified recently. In this paper, we re-identified the P. carotovorum subsp. brasiliensis isolates from those classified under the subspecies carotovorum and newly isolated P. carotovorum subsp. brasiliensis strains. All isolates were able to produce plant cell-wall degrading enzymes such as pectate lyase, polygalacturonase, cellulase and protease. We used genetic and biochemical methods to examine the diversity of P. carotovorum subsp. brasiliensis isolates, and found genetic diversity within the brasiliensis subsp. isolates in Korea. The restriction fragment length polymorphism analysis based on the recA gene revealed a unique pattern for the brasiliensis subspecies. The Korean brasiliensis subsp. isolates were divided into four clades based on pulsed-field gel electrophoresis. However, correlations between clades and isolated hosts or year could not be found, suggesting that diverse brasiliensis subsp. isolates existed.

Indexed as

16S rDNAPectobacterium catorovorum subsp. brasiliensisPFGErecARFLP

Identifiers

PMID25288994
PMCPMC4174852

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.