Evidence map›Paper›PMID 25288792›Full record

ArticleThe Journal of biological chemistry2014

Changes in signal transducer and activator of transcription 3 (STAT3) dynamics induced by complexation with pharmacological inhibitors of Src homology 2 (SH2) domain dimerization.

Diana Resetca, Sina Haftchenary, Patrick T Gunning, Derek J Wilson

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 47 citations in OpenAlex.

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  17. Conformational Dynamics and Allostery in Pyruvate Kinase.The Journal of biological chemistry · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Diana ResetcaFrom the Center for Research in Mass Spectrometry, Department of Chemistry, York University, Toronto, Ontario M3J 1P3, Canada and.
Sina HaftchenaryDepartment of Chemical and Physical Sciences, University of Toronto Mississauga, Mississauga, Ontario L5L 1C6, Canada.
Patrick T GunningDepartment of Chemical and Physical Sciences, University of Toronto Mississauga, Mississauga, Ontario L5L 1C6, Canada.
Derek J WilsonFrom the Center for Research in Mass Spectrometry, Department of Chemistry, York University, Toronto, Ontario M3J 1P3, Canada and dkwilson@yorku.ca.
University of Toronto · CAYork University · CA

Funding

Canadian Institutes of Health Research
6 · The paper itself

Abstract

The activity of the transcription factor signal transducer and activator of transcription 3 (STAT3) is dysregulated in a number of hematological and solid malignancies. Development of pharmacological STAT3 Src homology 2 (SH2) domain interaction inhibitors holds great promise for cancer therapy, and a novel class of salicylic acid-based STAT3 dimerization inhibitors that includes orally bioavailable drug candidates has been recently developed. The compounds SF-1-066 and BP-1-102 are predicted to bind to the STAT3 SH2 domain. However, given the highly unstructured and dynamic nature of the SH2 domain, experimental confirmation of this prediction was elusive. We have interrogated the protein-ligand interaction of STAT3 with these small molecule inhibitors by means of time-resolved electrospray ionization hydrogen-deuterium exchange mass spectrometry. Analysis of site-specific evolution of deuterium uptake induced by the complexation of STAT3 with SF-1-066 or BP-1-102 under physiological conditions enabled the mapping of the in silico predicted inhibitor binding site to the STAT3 SH2 domain. The binding of both inhibitors to the SH2 domain resulted in significant local decreases in dynamics, consistent with solvent exclusion at the inhibitor binding site and increased rigidity of the inhibitor-complexed SH2 domain. Interestingly, inhibitor binding induced hot spots of allosteric perturbations outside of the SH2 domain, manifesting mainly as increased deuterium uptake, in regions of STAT3 important for DNA binding and nuclear localization.

Indexed as

Molecular Dynamics Simulationsrc Homology DomainsAmino Acid SequenceAminosalicylic AcidsAnimalsBinding SitesDeuterium Exchange MeasurementMiceModels, MolecularMolecular Sequence DataMolecular StructureProtein BindingProtein MultimerizationSmall Molecule LibrariesSpectrometry, Mass, Electrospray IonizationSTAT3 Transcription FactorAminosalicylic AcidsBP-1-102SF-1-066Small Molecule LibrariesSTAT3 Transcription FactorSulfonamidesAllosteric RegulationDimerization InhibitorHydrogen-Deuterium ExchangeHydrogen Exchange Mass SpectrometryMass Spectrometry (MS)Protein DynamicSignal Transducers and Activators of Transcription 1 (STAT1)Signal Transducers and Activators of Transcription 3

Identifiers

PMID25288792
PMCPMC4239608
OpenAlexW2071278507

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.