Evidence map›Paper›PMID 25288747›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

KAISO, a critical regulator of p53-mediated transcription of CDKN1A and apoptotic genes.

Dong-In Koh, Dohyun Han, Hoon Ryu, Won-Il Choi, Bu-Nam Jeon, Min-Kyeong Kim, Youngsoo Kim, Jin Young Kim, Lee Parry, Alan R Clarke and 2 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Proteins That Read DNA Methylation.Advances in experimental medicine and biology · 2022
    Article
  9. Deletion of murineSmall GTPases · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Understanding p53 functions through p53 antibodies.Journal of molecular cell biology · 2019
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Zinc Finger Readers of Methylated DNA.Molecules (Basel, Switzerland) · 2018
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 3 countries.

Dong-In KohBrain Korea 21 Plus Project for Medical Sciences, Department of Biochemistry and Molecular Biology, Severance Biomedical Research Institute, Yonsei University School of Medicine, SeoDaeMoon-Ku, Seoul 120-752, Korea;
Dohyun HanDepartment of Biomedical Sciences and Biomedical Engineering, Seoul National University College of Medicine, Seoul 110-799, Korea;
Hoon RyuVA Boston Healthcare System and Department of Neurology, Boston University School of Medicine, Boston, MA 02130;
Won-Il ChoiBrain Korea 21 Plus Project for Medical Sciences, Department of Biochemistry and Molecular Biology, Severance Biomedical Research Institute, Yonsei University School of Medicine, SeoDaeMoon-Ku, Seoul 120-752, Korea;
Bu-Nam JeonBrain Korea 21 Plus Project for Medical Sciences, Department of Biochemistry and Molecular Biology, Severance Biomedical Research Institute, Yonsei University School of Medicine, SeoDaeMoon-Ku, Seoul 120-752, Korea;
Min-Kyeong KimBrain Korea 21 Plus Project for Medical Sciences, Department of Biochemistry and Molecular Biology, Severance Biomedical Research Institute, Yonsei University School of Medicine, SeoDaeMoon-Ku, Seoul 120-752, Korea;
Youngsoo KimDepartment of Biomedical Sciences and Biomedical Engineering, Seoul National University College of Medicine, Seoul 110-799, Korea;
Jin Young KimMass Spectrometry Research Center, Korea Basic Science Institute, Ochang-eup, Cheongwon-gun, Chungbuk 363-883, Korea;
Lee ParryCardiff School of Biosciences, Cardiff University, Cardiff CF10 3XQ, United Kingdom; and.
Alan R ClarkeCardiff School of Biosciences, Cardiff University, Cardiff CF10 3XQ, United Kingdom; and.
Albert B ReynoldsDepartment of Cell Biology, Vanderbilt University, Nashville, TN 37232-2175.
Man-Wook HurBrain Korea 21 Plus Project for Medical Sciences, Department of Biochemistry and Molecular Biology, Severance Biomedical Research Institute, Yonsei University School of Medicine, SeoDaeMoon-Ku, Seoul 120-752, Korea; mwhur2@yuhs.ac.
Yonsei University · KRCardiff University · GBSeoul National University · KRKorea Basic Science Institute · KRVA Boston Healthcare System · USVanderbilt University · US

Funding

Epigenetic Regulation of Heterochromatin Condensation in Huntington's DiseaseR01NS067283 · NINDS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI RYU, HOON · 2011 to 2015
$1.2M
Role of p120-catenin in cell transformationR01GM102524 · NIGMS · VANDERBILT UNIVERSITY · PI REYNOLDS, ALBERT B · 2013 to 2016
$1.2M
Cancer Research UK 15937NIGMS NIH HHS R01 GM102524NINDS NIH HHS R01 NS067283
6 · The paper itself

Abstract

An unresolved issue in genotoxic stress response is identification of induced regulatory proteins and how these activate tumor suppressor p53 to determine appropriate cell responses. Transcription factor KAISO was previously described to repress transcription following binding to methylated DNA. In this study, we show that KAISO is induced by DNA damage in p53-expressing cells and then interacts with the p53-p300 complex to increase acetylation of p53 K320 and K382 residues, although decreasing K381 acetylation. Moreover, the p53 with this particular acetylation pattern shows increased DNA binding and potently induces cell cycle arrest and apoptosis by activating transcription of CDKN1A (cyclin-dependent kinase inhibitor 1) and various apoptotic genes. Analogously, in Kaiso KO mouse embryonic fibroblast cells, p53-to-promoter binding and up-regulation of p21 and apoptosis gene expression is significantly compromised. KAISO may therefore be a critical regulator of p53-mediated cell cycle arrest and apoptosis in response to various genotoxic stresses in mammalian cells.

Indexed as

ApoptosisAcetylationAnimalsCell CycleCell LineCell ProliferationCyclin-Dependent Kinase Inhibitor p21DNADNA DamageDNA MethylationE1A-Associated p300 ProteinFemaleFibroblastsHCT116 CellsHEK293 CellsHumansCDKN1A protein, humanCdkn1a protein, mouseCyclin-Dependent Kinase Inhibitor p21DNAE1A-Associated p300 ProteinEP300 protein, humanTP53 protein, humanTranscription FactorsTumor Suppressor Protein p53ZBTB33 protein, humanapoptosiscell cycle arrestKAISOp300p53

Identifiers

PMID25288747
PMCPMC4210320
OpenAlexW2113299082

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.