Evidence map›Paper›PMID 25287832›Full record

ArticleHuman genetics2015

DUF1220 copy number is linearly associated with increased cognitive function as measured by total IQ and mathematical aptitude scores.

Jonathon M Davis, Veronica B Searles, Nathan Anderson, Jonathon Keeney, Armin Raznahan, L John Horwood, David M Fergusson, Martin A Kennedy, Jay Giedd, James M Sikela

Open access · greenAbstract read
In one paragraph

Article in Human genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 39 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
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  5. Article
  6. Article
  7. Proteolytic activation of human-specific Olduvai domains by the furin protease.International journal of biological macromolecules · 2023
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  8. Review
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  12. Article
  13. Article
  14. Enhancing our brains: Genomic mechanisms underlying cortical evolution.Seminars in cell & developmental biology · 2018
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Autism As a Disorder of High Intelligence.Frontiers in neuroscience · 2016
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Jonathon M DavisDepartment of Biochemistry and Molecular Genetics and Human Medical Genetics, Medical Scientist Training and Neuroscience Programs, University of Colorado School of Medicine, Anschutz Medical Campus, RC1-S, L18-10125, 12801 East 17th Ave, Mailstop 8101, P.O. Box 6511, Aurora, CO, 80045, USA.
Veronica B Searles
Nathan Anderson
Jonathon Keeney
Armin Raznahan
L John Horwood
David M Fergusson
Martin A Kennedy
Jay Giedd
James M Sikela
University of Colorado Anschutz Medical Campus · USUniversity of Otago · NZNational Institute of Mental Health · USUniversity of Colorado Denver · US

Funding

Section on Developmental NeurogenomicsZIAMH002949 · NIMH · NATIONAL INSTITUTE OF MENTAL HEALTH · PI RAZNAHAN, ARMIN · 2016 to 2025
$30.0M
Medical Scientist Training ProgramT32GM008497 · NIGMS · UNIVERSITY OF COLORADO DENVER · PI WILSON, CARA C. · 1993 to 2022
$15.2M
Investigation of DUF1220 Domains in Human Brain Function and DiseaseR01MH081203 · NIMH · UNIVERSITY OF COLORADO DENVER · PI SIKELA, JAMES M · 2009 to 2013
$2.0M
Intramural NIH HHS Z99 MH999999NIGMS NIH HHS T32 GM008497NIMH NIH HHS R01 MH081203
6 · The paper itself

Abstract

DUF1220 protein domains exhibit the greatest human lineage-specific copy number expansion of any protein-coding sequence in the genome, and variation in DUF1220 copy number has been linked to both brain size in humans and brain evolution among primates. Given these findings, we examined associations between DUF1220 subtypes CON1 and CON2 and cognitive aptitude. We identified a linear association between CON2 copy number and cognitive function in two independent populations of European descent. In North American males, an increase in CON2 copy number corresponded with an increase in WISC IQ (R (2) = 0.13, p = 0.02), which may be driven by males aged 6-11 (R (2) = 0.42, p = 0.003). We utilized ddPCR in a subset as a confirmatory measurement. This group had 26-33 copies of CON2 with a mean of 29, and each copy increase of CON2 was associated with a 3.3-point increase in WISC IQ (R (2) = 0.22, p = 0.045). In individuals from New Zealand, an increase in CON2 copy number was associated with an increase in math aptitude ability (R (2) = 0.10 p = 0.018). These were not confounded by brain size. To our knowledge, this is the first study to report a replicated association between copy number of a gene coding sequence and cognitive aptitude. Remarkably, dosage variations involving DUF1220 sequences have now been linked to human brain expansion, autism severity and cognitive aptitude, suggesting that such processes may be genetically and mechanistically inter-related. The findings presented here warrant expanded investigations in larger, well-characterized cohorts.

Indexed as

AdolescentAdultAptitudeBrainCarrier ProteinsChildChromosomes, Human, Pair 1CognitionComparative Genomic HybridizationDNA Copy Number VariationsFemaleFollow-Up StudiesHumansIntelligenceMaleMathematicsCarrier Proteins

Identifiers

PMID25287832
PMCPMC5898241
OpenAlexW2139257860

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.