Evidence map›Paper›PMID 25286383›Full record

ArticleMolecular and biochemical parasitology2014

Canonical histone H2Ba and H2A.X dimerize in an opposite genomic localization to H2A.Z/H2B.Z dimers in Toxoplasma gondii.

Silvina S Bogado, María C Dalmasso, Agustina Ganuza, Kami Kim, William J Sullivan, Sergio O Angel, Laura Vanagas

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and biochemical parasitology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact, top 90% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Unravelling the sexual developmental biology ofFrontiers in cellular and infection microbiology · 2023
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  7. Emerging Therapeutic Targets AgainstFrontiers in cellular and infection microbiology · 2020
    Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Silvina S BogadoLaboratorio de Parasitología Molecular, IIB-INTECH, CONICET-UNSAM, Av. Intendente Marino Km. 8.2, C.C 164, (B7130IIWA), Chascomús, Prov. Buenos Aires, Argentina.
María C DalmassoLaboratorio de Parasitología Molecular, IIB-INTECH, CONICET-UNSAM, Av. Intendente Marino Km. 8.2, C.C 164, (B7130IIWA), Chascomús, Prov. Buenos Aires, Argentina.
Agustina GanuzaLaboratorio de Parasitología Molecular, IIB-INTECH, CONICET-UNSAM, Av. Intendente Marino Km. 8.2, C.C 164, (B7130IIWA), Chascomús, Prov. Buenos Aires, Argentina; Scientific Research Commission (CIC, Buenos Aires), Argentina.
Kami KimDepartment of Microbiology & Immunology, Albert Einstein College of Medicine, Bronx, NY, USA; Department of Pathology, Albert Einstein College of Medicine, Bronx, NY, USA; Department of Medicine, Albert Einstein College of Medicine, Bronx, NY, USA.
William J SullivanDepartment of Pharmacology & Toxicology, Indiana University School of Medicine, Indianapolis, IN, USA; Department of Microbiology & Immunology, Indiana University School of Medicine, Indianapolis, IN, USA.
Sergio O AngelLaboratorio de Parasitología Molecular, IIB-INTECH, CONICET-UNSAM, Av. Intendente Marino Km. 8.2, C.C 164, (B7130IIWA), Chascomús, Prov. Buenos Aires, Argentina.
Laura VanagasLaboratorio de Parasitología Molecular, IIB-INTECH, CONICET-UNSAM, Av. Intendente Marino Km. 8.2, C.C 164, (B7130IIWA), Chascomús, Prov. Buenos Aires, Argentina. Electronic address: vanagas@intech.gov.ar.
Consejo Nacional de Investigaciones Científicas y Técnicas · ARAlbert Einstein College of Medicine · USIndiana University School of Medicine

Funding

A Systems Biology Approach to the Model Apicomplexan Toxoplasma gondiiRC4AI092801 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI KIM, KAMI, SULLIVAN, WILLIAM J · 2010 to 2010
$5.6M
Toxoplasma Epigenomics and Gene ExpressionR01AI087625 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI KIM, KAMI · 2010 to 2014
$3.5M
GCN5-mediated transcription in AIDS pathogen ToxoplasmaR01AI077502 · NIAID · INDIANA UNIVERSITY INDIANAPOLIS · PI SULLIVAN, WILLIAM J · 2009 to 2013
$1.8M
Novel nucleosome composition and modifications in protozoal parasite Toxoplasma gR01AI083162 · NIAID · INSTITUTE/RESEARCH/BIOTECHNOLOGY FDN · PI ANGEL, SERGIO OSCAR · 2009 to 2012
$450k
NIAID NIH HHS R01 AI077502NIAID NIH HHS R01 AI083162NIAID NIH HHS R01 AI087625NIAID NIH HHS R01AI087625NIAID NIH HHS RC4 AI092801NIAID NIH HHS RC4AI092801PHS HHS NIH-NIAID R01AI083162
6 · The paper itself

Abstract

Histone H2Ba of Toxoplasma gondii was expressed as recombinant protein (rH2Ba) and used to generate antibody in mouse that is highly specific. Antibody recognizing rH2Ba detects a single band in tachyzoite lysate of the expected molecular weight (12kDa). By indirect immunofluorescence (IFA) in in vitro grown tachyzoites and bradyzoites, the signal was detected only in the parasite nucleus. The nucleosome composition of H2Ba was determined through co-immunoprecipitation assays. H2Ba was detected in the same immunocomplex as H2A.X, but not with H2A.Z. Through chromatin immunoprecipitation (ChIP) assays and qPCR, it was observed that H2Ba is preferentially located at promoters of inactive genes and silent regions, accompanying H2A.X and opposed to H2A.Z/H2B.Z dimers.

Indexed as

Genome, ProtozoanAntibodies, MonoclonalChromatin ImmunoprecipitationHistonesModels, BiologicalNucleosomesProtein MultimerizationProtein TransportRecombinant ProteinsToxoplasmaAntibodies, MonoclonalHistonesNucleosomesRecombinant ProteinsCanonical histonesChIPChromatinEpigeneticsNucleosomeToxoplasma

Identifiers

PMID25286383
PMCPMC4254167
OpenAlexW2098661936

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.