Evidence map›Paper›PMID 25286121›Full record

ArticleDevelopmental biology2015

Evolutionarily conserved role for SoxC genes in neural crest specification and neuronal differentiation.

Benjamin R Uy, Marcos Simoes-Costa, Daniel E S Koo, Tatjana Sauka-Spengler, Marianne E Bronner

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. βIII-Tubulin Gene Regulation in Health and Disease.Frontiers in cell and developmental biology · 2022
    Review
  5. Eyes on CHARGE syndrome: Roles of CHD7 in ocular development.Frontiers in cell and developmental biology · 2022
    Review
  6. Review
  7. Article
  8. Article
  9. Keeping an eye on SOXC proteins.Developmental dynamics : an official publication of the American Association of Anatomists · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Benjamin R UyCalifornia Institute of Technology Pasadena, Division of Biology and Biological Engineering, 139-74, CA 91125, United States.
Marcos Simoes-CostaCalifornia Institute of Technology Pasadena, Division of Biology and Biological Engineering, 139-74, CA 91125, United States.
Daniel E S KooCalifornia Institute of Technology Pasadena, Division of Biology and Biological Engineering, 139-74, CA 91125, United States.
Tatjana Sauka-SpenglerCalifornia Institute of Technology Pasadena, Division of Biology and Biological Engineering, 139-74, CA 91125, United States.
Marianne E BronnerCalifornia Institute of Technology Pasadena, Division of Biology and Biological Engineering, 139-74, CA 91125, United States.
California Institute of Technology · US

Funding

Evolutionary Origin of Vertebrate Neural Crest Gene NetworksR01DE017911 · NIDCR · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI BRONNER, MARIANNE · 2007 to 2011
$2.7M
Emergence of developmental and genomic complexity in a basal vertebrateR01GM090049 · NIGMS · BENAROYA RESEARCH INST AT VIRGINIA MASON · PI AMEMIYA, CHRIS T., BRONNER, MARIANNE · 2010 to 2013
$2.2M
Regulatory Changes Mediating Emergence of Novel Neural Crest TraitsR01NS086907 · NINDS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI BRONNER, MARIANNE · 2014 to 2018
$1.8M
Medical Research Council G0902418NIDCR NIH HHS DE017911NIDCR NIH HHS R01 DE017911NIGMS NIH HHS R01 GM090049NINDS NIH HHS NS086907NINDS NIH HHS R01 NS086907
6 · The paper itself

Abstract

Members of the Sox family of transcription factors play a variety of critical developmental roles in both vertebrates and invertebrates. Whereas SoxBs and SoxEs are involved in neural and neural crest development, respectively, far less is known about members of the SoxC subfamily. To address this from an evolutionary perspective, we compare expression and function of SoxC genes in neural crest cells and their derivatives in lamprey (Petromyzon marinus), a basal vertebrate, to frog (Xenopus laevis). Analysis of transcript distribution reveals conservation of lamprey and X. laevis SoxC expression in premigratory neural crest, branchial arches, and cranial ganglia. Moreover, morpholino-mediated loss-of-function of selected SoxC family members demonstrates essential roles in aspects of neural crest development in both organisms. The results suggest important and conserved functions of SoxC genes during vertebrate evolution and a particularly critical, previously unrecognized role in early neural crest specification.

Indexed as

Animalsbeta-GalactosidaseCloning, MolecularDNA, ComplementaryDNA PrimersGene Expression Regulation, DevelopmentalGene Knockdown TechniquesIn Situ HybridizationNeural CrestNeural PlateOligonucleotidesPetromyzonPhylogenySOXC Transcription FactorsXenopus laevisbeta-GalactosidaseDNA, ComplementaryDNA PrimersOligonucleotidesSOXC Transcription FactorsEvolutionLampreyNeural crestNeuronal differentiationSoxC

Identifiers

PMID25286121
PMCPMC4545591
OpenAlexW1984186085

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.