Evidence map›Paper›PMID 25285993›Full record

ArticleJournal of visualized experiments : JoVE2014

Luminescence resonance energy transfer to study conformational changes in membrane proteins expressed in mammalian cells.

Drew M Dolino, Swarna S Ramaswamy, Vasanthi Jayaraman

Open access · bronzeAbstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Isolation and characterization of extracellular vesicles and future directions in diagnosis and therapy.Wiley interdisciplinary reviews. Nanomedicine and nanobiotechnology · 2023
    Review
  3. Review
  4. Long-lived lanthanide emissionChemical science · 2021
    Article
  5. Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Drew M DolinoCenter for Membrane Biology, Department of Biochemistry and Molecular Biology, University of Texas Health Science Center at Houston.
Swarna S RamaswamyCenter for Membrane Biology, Department of Biochemistry and Molecular Biology, University of Texas Health Science Center at Houston.
Vasanthi JayaramanCenter for Membrane Biology, Department of Biochemistry and Molecular Biology, University of Texas Health Science Center at Houston; Vasanthi.Jayaraman@uth.tmc.edu.
The University of Texas Health Science Center at Houston · US

Funding

Structure and Function of NMDA ReceptorsR01GM094246 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI JAYARAMAN, VASANTHI · 2011 to 2016
$2.0M
NIGMS NIH HHS GM094246NIGMS NIH HHS R01 GM094246
6 · The paper itself

Abstract

Luminescence Resonance Energy Transfer, or LRET, is a powerful technique used to measure distances between two sites in proteins within the distance range of 10-100 Å. By measuring the distances under various ligated conditions, conformational changes of the protein can be easily assessed. With LRET, a lanthanide, most often chelated terbium, is used as the donor fluorophore, affording advantages such as a longer donor-only emission lifetime, the flexibility to use multiple acceptor fluorophores, and the opportunity to detect sensitized acceptor emission as an easy way to measure energy transfer without the risk of also detecting donor-only signal. Here, we describe a method to use LRET on membrane proteins expressed and assayed on the surface of intact mammalian cells. We introduce a protease cleavage site between the LRET fluorophore pair. After obtaining the original LRET signal, cleavage at that site removes the specific LRET signal from the protein of interest allowing us to quantitatively subtract the background signal that remains after cleavage. This method allows for more physiologically relevant measurements to be made without the need for purification of protein.

Indexed as

AnimalsCHO CellsCricetulusFluorescent DyesHEK293 CellsHumansLuminescent MeasurementsMembrane ProteinsModels, MolecularProtein ConformationReceptors, AMPAFluorescent DyesMembrane ProteinsReceptors, AMPA

Identifiers

PMID25285993
PMCPMC4596616
OpenAlexW1982728396

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.