Evidence map›Paper›PMID 25284610›Full record

ReviewImmunology letters2014

Linking genetic variation in human Toll-like receptor 5 genes to the gut microbiome's potential to cause inflammation.

Cynthia A Leifer, Cameron McConkey, Sha Li, Benoit Chassaing, Andrew T Gewirtz, Ruth E Ley

Open access · greenAbstract readReview
In one paragraph

Review in Immunology letters, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
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  3. Review
  4. Article
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  6. Frontiers in immunology · 2024
    Article
  7. Article
  8. Viral Infections, the Microbiome, and Probiotics.Frontiers in cellular and infection microbiology · 2020
    Review
  9. Article
  10. Article
  11. Article
  12. Article
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  15. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Cynthia A LeiferDepartment of Microbiology and Immunology, Cornell University, Ithaca, NY 14853, United States. Electronic address: cal59@cornell.edu.
Cameron McConkeyDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853, United States.
Sha LiDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853, United States.
Benoit ChassaingCenter for Inflammation, Immunity and Infection, Georgia State University, Atlanta, GA 30303, United States.
Andrew T GewirtzCenter for Inflammation, Immunity and Infection, Georgia State University, Atlanta, GA 30303, United States.
Ruth E LeyDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853, United States. Electronic address: rel222@cornell.edu.
Cornell University · USGeorgia State University · US

Funding

Toll-like receptor 9: trafficking and signalingR01AI076588 · NIAID · CORNELL UNIVERSITY · PI LEIFER, CYNTHIA A · 2009 to 2013
$1.8M
Toll-like receptor 9 proteolytic processing and signalingR03AI097671 · NIAID · CORNELL UNIVERSITY · PI LEIFER, CYNTHIA A · 2012 to 2013
$154k
NIAID NIH HHS R01 AI076588NIAID NIH HHS R03 AI097671
6 · The paper itself

Abstract

Immunodeficiencies can lead to alterations of the gut microbiome that render it pathogenic and capable of transmitting disease to naïve hosts. Here, we review the role of Toll-like receptor (TLR) 5, the innate receptor for bacterial flagellin, in immune responses to the normal gut microbiota with a focus its role on adaptive immunity. Loss of TLR5 has profound effects on the microbiota that include greater temporal instability of major lineages and upregulation of flagellar motility genes that may be linked to the reduced levels of anti-flagellin antibodies in the TLR5(-/-) host. A variety of human TLR5 gene alleles exist that also associated with inflammatory conditions and may do so via effects on the gut microbiome and altered host-microbial crosstalk.

Indexed as

MicrobiotaAdaptive ImmunityAnimalsAntibody FormationFlagellinGene Expression Regulation, BacterialGenetic Predisposition to DiseaseGenetic VariationHumansImmunity, InnateInflammationIntestinal MucosaMiceMice, KnockoutToll-Like Receptor 5FlagellinToll-Like Receptor 5Adaptive immunityAllelic variationGut microbiomeMetagenomicsTLR5Toll-like receptor 5

Identifiers

PMID25284610
PMCPMC4259828
OpenAlexW2059804687

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.