Evidence map›Paper›PMID 25282647›Full record

ArticleBioorganic & medicinal chemistry2014

Expanding the results of a high throughput screen against an isochorismate-pyruvate lyase to enzymes of a similar scaffold or mechanism.

Kathleen M Meneely, Qianyi Luo, Andrew P Riley, Byron Taylor, Anuradha Roy, Ross L Stein, Thomas E Prisinzano, Audrey L Lamb

Open access · bronzeAbstract read
In one paragraph

Article in Bioorganic & medicinal chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. An Open and Shut Case: The Interaction of Magnesium with MST Enzymes.Journal of the American Chemical Society · 2016
    Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Kathleen M MeneelyDepartment of Molecular Biosciences, University of Kansas, 1200 Sunnyside Ave, Lawrence, KS 66045, United States.
Qianyi LuoDepartment of Molecular Biosciences, University of Kansas, 1200 Sunnyside Ave, Lawrence, KS 66045, United States.
Andrew P RileyDepartment of Chemistry, University of Kansas, 1251 Wescoe Hall Dr, Lawrence, KS 66045, United States.
Byron TaylorHigh Throughput Screening Facility, University of Kansas, 2034 Becker Dr, Lawrence, KS 66047, United States.
Anuradha RoyHigh Throughput Screening Facility, University of Kansas, 2034 Becker Dr, Lawrence, KS 66047, United States.
Ross L SteinHigh Throughput Screening Facility, University of Kansas, 2034 Becker Dr, Lawrence, KS 66047, United States.
Thomas E PrisinzanoDepartment of Medicinal Chemistry, University of Kansas, 1251 Wescoe Hall Dr, Lawrence, KS 66045, United States.
Audrey L LambDepartment of Molecular Biosciences, University of Kansas, 1200 Sunnyside Ave, Lawrence, KS 66045, United States. Electronic address: lamb@ku.edu.
University of Kansas · US

Funding

Mentoring CoreP20GM103418 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI John A Stanford · 2012 to 2026
$63.0M
Transgenic & Gene-Targeting Shared ResourceP30CA168524 · NCI · UNIVERSITY OF KANSAS MEDICAL CENTER · PI ROY A. JENSEN · 2012 to 2026
$40.1M
UNDERSTANDING THE ROLE OF SMALL RNAS IN ARABIDOPSIS POLLEN DEVELOPMENTP20RR016475 · NCRR · UNIVERSITY OF KANSAS MEDICAL CENTER · PI LUSHINGTON, GERALD H · 2001 to 2011
$38.1M
TRAINING GRANT IN DYNAMIC ASPECTS OF CHEMICAL BIOLOGYT32GM008545 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI LAMB, AUDREY L · 1994 to 2019
$4.9M
Center for Cancer Experimental TherapeuticsP30GM103495 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI TIMMERMANN, BARBARA N · 2012 to 2014
$3.2M
Salicylate production in siderophore biosynthesisR01AI077725 · NIAID · UNIVERSITY OF KANSAS LAWRENCE · PI LAMB, AUDREY L · 2009 to 2012
$1.2M
Avance II 500 High Performance Digital NMR Spectrometer SystemS10RR024664 · NCRR · UNIVERSITY OF KANSAS LAWRENCE · PI VANDERVELDE, DAVID G · 2007 to 2007
$468k
Structure-function analyses of siderophore biosynthetic enzymesK02AI093675 · NIAID · UNIVERSITY OF KANSAS LAWRENCE · PI LAMB, AUDREY L · 2011 to 2014
$428k
NCI NIH HHS 5 P30 CA168524NCI NIH HHS P30 CA168524NCRR NIH HHS P20 RR016475NCRR NIH HHS S10 RR024664NIAID NIH HHS K02 AI093675NIAID NIH HHS R01 AI077725NIAID NIH HHS R01 AI77725NIGMS NIH HHS P20 GM103418NIGMS NIH HHS P30 GM103495NIGMS NIH HHS T32 GM008545NIGMS NIH HHS T32 GM08545
6 · The paper itself

Abstract

Antibiotic resistance is a growing health concern, and new avenues of antimicrobial drug design are being actively sought. One suggested pathway to be targeted for inhibitor design is that of iron scavenging through siderophores. Here we present a high throughput screen to the isochorismate-pyruvate lyase of Pseudomonas aeruginosa, an enzyme required for the production of the siderophore pyochelin. Compounds identified in the screen are high nanomolar to low micromolar inhibitors of the enzyme and produce growth inhibition in PAO1 P. aeruginosa in the millimolar range under iron-limiting conditions. The identified compounds were also tested for enzymatic inhibition of Escherichia coli chorismate mutase, a protein of similar fold and similar chemistry, and of Yersinia enterocolitica salicylate synthase, a protein of differing fold but catalyzing the same lyase reaction. In both cases, subsets of the inhibitors from the screen were found to be inhibitory to enzymatic activity (mutase or synthase) in the micromolar range and capable of growth inhibition in their respective organisms (E. coli or Y. enterocolitica).

Indexed as

Anti-Bacterial AgentsBacterial InfectionsChorismic AcidEnzyme InhibitorsEscherichia coliHigh-Throughput Screening AssaysHumansModels, MolecularOxo-Acid-LyasesPseudomonas aeruginosaYersinia enterocoliticaAnti-Bacterial Agentschorismate pyruvate lyaseChorismic AcidEnzyme Inhibitorsisochorismic acidOxo-Acid-LyasesChorismate mutaseIsochorismate-pyruvate lyaseSalicylate synthaseSiderophore

Identifiers

PMID25282647
PMCPMC4254016
OpenAlexW1986566599

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.