Evidence map›Paper›PMID 25281687›Full record

ArticleThe Plant cell2014

Critical function of a Chlamydomonas reinhardtii putative polyphosphate polymerase subunit during nutrient deprivation.

Munevver Aksoy, Wirulda Pootakham, Arthur R Grossman

Abstract read
In one paragraph

Article in The Plant cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

  1. Article
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  8. Evolutionary conservation and metabolic significance of autophagy in algae.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  9. Article
  10. The Protein Scaffolding Functions of Polyphosphate.Journal of molecular biology · 2024
    Review
  11. Review
  12. Article
  13. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Munevver AksoyThe Carnegie Institution for Science, Department of Plant Biology, Stanford, California 94305 maksoy1@stanford.edu.
Wirulda PootakhamThe Carnegie Institution for Science, Department of Plant Biology, Stanford, California 94305 National Center for Genetic Engineering and Biotechnology, Pathum Thani 12120, Thailand.
Arthur R GrossmanThe Carnegie Institution for Science, Department of Plant Biology, Stanford, California 94305.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Forward genetics was used to isolate Chlamydomonas reinhardtii mutants with altered abilities to acclimate to sulfur (S) deficiency. The ars76 mutant has a deletion that eliminates several genes, including VACUOLAR TRANSPORTER CHAPERONE1 (VTC1), which encodes a component of a polyphosphate polymerase complex. The ars76 mutant cannot accumulate arylsulfatase protein or mRNA and shows marked alterations in levels of many transcripts encoded by genes induced during S deprivation. The mutant also shows little acidocalcisome formation compared with wild-type, S-deprived cells and dies more rapidly than wild-type cells following exposure to S-, phosphorus-, or nitrogen (N)-deficient conditions. Furthermore, the mutant does not accumulate periplasmic L-amino acid oxidase during N deprivation. Introduction of the VTC1 gene specifically complements the ars76 phenotypes, suggesting that normal acidocalcisome formation in cells deprived of S requires VTC1. Our data also indicate that a deficiency in acidocalcisome function impacts trafficking of periplasmic proteins, which can then feed back on the transcription of the genes encoding these proteins. These results and the reported function of vacuoles in degradation processes suggest a major role of the acidocalcisome in reshaping the cell during acclimation to changing environmental conditions.

Indexed as

Amino Acid SequenceAnion Transport ProteinsArylsulfatasesChlamydomonas reinhardtiiGene Expression Regulation, PlantGenetic Complementation TestImmunoblottingMicroscopy, ConfocalMicroscopy, Electron, TransmissionMolecular Sequence DataMutationNitrogenPhenotypePhosphorusPlant ProteinsPolyphosphatesAnion Transport ProteinsArylsulfatasesNitrogenPhosphorusPlant ProteinsPolyphosphatesSulfur

Identifiers

PMID25281687
PMCPMC4247568

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.