Evidence map›Paper›PMID 25280984›Full record

ArticleJournal of neuroscience methods2015

Identification of functional synaptic plasticity from spiking activities using nonlinear dynamical modeling.

Dong Song, Rosa H M Chan, Brian S Robinson, Vasilis Z Marmarelis, Ioan Opris, Robert E Hampson, Sam A Deadwyler, Theodore W Berger

Abstract read
In one paragraph

Article in Journal of neuroscience methods, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. A 512-Channel Multi-Layer Polymer-Based Neural Probe Array.Journal of microelectromechanical systems : a joint IEEE and ASME publication on microstructures, microactuators, microsensors, and microsystems · 2020
    Article
  3. Article
  4. Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Dong SongDepartment of Biomedical Engineering, University of Southern California, Los Angeles, CA 90089, USA. Electronic address: dsong@usc.edu.
Rosa H M ChanDepartment of Electronic Engineering, City University of Hong Kong, Hong Kong, China. Electronic address: rosachan@cityu.edu.hk.
Brian S RobinsonDepartment of Biomedical Engineering, University of Southern California, Los Angeles, CA 90089, USA. Electronic address: brian.samuel.robinson@gmail.com.
Vasilis Z MarmarelisDepartment of Biomedical Engineering, University of Southern California, Los Angeles, CA 90089, USA. Electronic address: marmarelis@hotmail.com.
Ioan OprisDepartment of Physiology & Pharmacology, Wake Forest University, School of Medicine, Winston-Salem, NC 27157, USA. Electronic address: ioanopris.phd@gmail.com.
Robert E HampsonDepartment of Physiology & Pharmacology, Wake Forest University, School of Medicine, Winston-Salem, NC 27157, USA. Electronic address: rhampson@wfubmc.edu.
Sam A DeadwylerDepartment of Physiology & Pharmacology, Wake Forest University, School of Medicine, Winston-Salem, NC 27157, USA. Electronic address: sdeadwyl@wfubmc.edu.
Theodore W BergerDepartment of Biomedical Engineering, University of Southern California, Los Angeles, CA 90089, USA. Electronic address: berger@bmsr.usc.edu.

Funding

Tumor Tissue CoreP30CA012197 · NCI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI Ruben A. Mesa · 1985 to 2026
$55.4M
TrainingP41EB001978 · NIBIB · UNIVERSITY OF SOUTHERN CALIFORNIA · PI KHOO, MICHAEL C K · 2003 to 2017
$18.1M
Predictive modeling of bioelectric activity on mammalian multilayered neuronal stU01GM104604 · NIGMS · UNIVERSITY OF UTAH · PI BERGER, THEODORE W., LAZZI, GIANLUCA · 2012 to 2016
$2.8M
NCI NIH HHS P30 CA012197NIBIB NIH HHS P41 EB001978NIGMS NIH HHS U01 GM104604
6 · The paper itself

Abstract

This paper presents a systems identification approach for studying the long-term synaptic plasticity using natural spiking activities. This approach consists of three modeling steps. First, a multi-input, single-output (MISO), nonlinear dynamical spiking neuron model is formulated to estimate and represent the synaptic strength in means of functional connectivity between input and output neurons. Second, this MISO model is extended to a nonstationary form to track the time-varying properties of the synaptic strength. Finally, a Volterra modeling method is used to extract the synaptic learning rule, e.g., spike-timing-dependent plasticity, for the explanation of the input-output nonstationarity as the consequence of the past input-output spiking patterns. This framework is developed to study the underlying mechanisms of learning and memory formation in behaving animals, and may serve as the computational basis for building the next-generation adaptive cortical prostheses.

Indexed as

Models, NeurologicalNonlinear DynamicsAction PotentialsAnimalsComputer SimulationHippocampusNerve NetNeuronal PlasticityNeuronsLearning ruleSpatio-temporal patternSpikeSpike-timing-dependent plasticity

Identifiers

PMID25280984
PMCPMC4383743

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.