Evidence map›Paper›PMID 25277494›Full record

ArticleTropical animal health and production2015

Molecular pathotyping and phylogenesis of the first Newcastle disease virus strain isolated from backyard chickens in Qatar.

Mohamed Haroun, Khalid Abdelhakeem Mohran, Mahmoud Mahmoud Hassan, Nawal Mohamed Abdulla

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Article in Tropical animal health and production, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Mohamed HarounVirology Unit, Veterinary Laboratory, Department of Animal Resources, P.O. Box 23211, Doha, Qatar, mismail_99@yahoo.com.
Khalid Abdelhakeem Mohran
Mahmoud Mahmoud Hassan
Nawal Mohamed Abdulla

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The first Newcastle disease virus (NDV) field strain (NDV-QC08), previously isolated and identified in Qatar, was further subjected to molecular characterization and phylogenic analysis at passage levels two. Initial amplification and detection of the complementary DNA (cDNA) fragment of the NDV RNA amnioallantoic fluid (AAF) extract demonstrated the positive virus identity using real-time reverse transcriptase chain reaction (RRT-PCR). Partial sequence of the totally amplified 216 bp of the functional cleavage region encoding the F gene retrieved (112)R-R-Q-K-R-F(117) amino acid motif indicating the velogenic nature of the strain, and confirming the previously investigated in-vivo pathotyping. Phylogenic analysis and genotypic clustering studies classified the strain under NDV subgenotype VIId.

Indexed as

Amino Acid MotifsAnimalsChickensCluster AnalysisDNA, ComplementaryDNA, ViralGenotypeMeatNewcastle DiseaseNewcastle disease virusPhylogenyQatarReal-Time Polymerase Chain ReactionReverse Transcriptase Polymerase Chain ReactionVirus DiseasesDNA, ComplementaryDNA, Viral

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.