ArticleOpen biology2014
A comparison of the Caulobacter NA1000 and K31 genomes reveals extensive genome rearrangements and differences in metabolic potential.
Article in Open biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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Who cites it
13 citing papers in PubMed.
- Contrasting stability of fungal and bacterial communities during long-term decomposition of fungal necromass in Arctic tundra.Environmental microbiome · 2025Article
- The genus Caulobacter and its role in plant microbiomes.World journal of microbiology & biotechnology · 2022Review
- Plasmids Bring Additional Capabilities to Caulobacter Isolates.Current microbiology · 2022Article
- Evolutionary history of Caulobacter toxin-antitoxin systems.Current microbiology · 2021Article
- Exploring the piezotolerant/piezophilic microbial community and genomic basis of piezotolerance within the deep subsurface Deccan traps.Extremophiles : life under extreme conditions · 2019Article
- Analyses of four new Caulobacter Phicbkviruses indicate independent lineages.The Journal of general virology · 2019Article
- Genome Comparisons of Wild Isolates of Caulobacter crescentus Reveal Rates of Inversion and Horizontal Gene Transfer.Current microbiology · 2019Article
- Complete genome sequence of3 Biotech · 2019Article
- Complete Genome Sequence of a Wild-Type Isolate of Caulobacter vibrioides Strain CB2.Microbiology resource announcements · 2018Article
- Genomic Diversity of Type B3 Bacteriophages of Caulobacter crescentus.Current microbiology · 2017Article
- Cell cycle progression in Caulobacter requires a nucleoid-associated protein with high AT sequence recognition.Proceedings of the National Academy of Sciences of the United States of America · 2016Article
- Conservation of the Essential Genome Among Caulobacter and Brevundimonas Species.Current microbiology · 2016Article
- Genome sequence and phenotypic characterization of Caulobacter segnis.Current microbiology · 2015Article
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Authors and funding
6 authors.
Funding
Abstract
The genus Caulobacter is found in a variety of habitats and is known for its ability to thrive in low-nutrient conditions. K31 is a novel Caulobacter isolate that has the ability to tolerate copper and chlorophenols, and can grow at 4 ° C with a doubling time of 40 h. K31 contains a 5.5 Mb chromosome that codes for more than 5500 proteins and two large plasmids (234 and 178 kb) that code for 438 additional proteins. A comparison of the K31 and the Caulobacter crescentus NA1000 genomes revealed extensive rearrangements of gene order, suggesting that the genomes had been randomly scrambled. However, a careful analysis revealed that the distance from the origin of replication was conserved for the majority of the genes and that many of the rearrangements involved inversions that included the origin of replication. On a finer scale, numerous small indels were observed. K31 proteins involved in essential functions shared 80-95% amino acid sequence identity with their C. crescentus homologues, while other homologue pairs tended to have lower levels of identity. In addition, the K31 chromosome contains more than 1600 genes with no homologue in NA1000.
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