Evidence map›Paper›PMID 25273091›Full record

ArticleCancer research2014

TGFβ receptor 1: an immune susceptibility gene in HPV-associated cancer.

Chaya Levovitz, Dan Chen, Emma Ivansson, Ulf Gyllensten, John P Finnigan, Sara Alshawish, Weijia Zhang, Eric E Schadt, Marshal R Posner, Eric M Genden and 2 more

Registry-linked trialOpen access · bronzeAbstract read
In one paragraph

Article in Cancer research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03427411 (Phase II Trial of M7824 in Subjects With HPV Associated Malignancies), which is not on this map. Cited by 33 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 2 pooled it
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03427411 phase2completednot on this mapstarted 2018, after this paper: background citation

Phase II Trial of M7824 in Subjects With HPV Associated Malignancies

TypeinterventionalSponsorNational Cancer Institute (NCI)Ran2018 to 2022Enrolled57ConditionsHuman Papilloma Virus, Cervical Cancer, Oropharyngeal Cancer, Anal CancerArmsM7824
3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 2 syntheses or guidelines pooled it, 54 citations in OpenAlex.

  1. Guideline
  2. Pooled it
  3. Trial
  4. Trial
  5. Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Increased Abundances of CD16Biomedicines · 2022
    Article
  14. Article
  15. Tumor in the Crossfire: Inhibiting TGF-β to Enhance Cancer Immunotherapy.BioDrugs : clinical immunotherapeutics, biopharmaceuticals and gene therapy · 2022
    Review
  16. Review
  17. Review
  18. Immunotherapy for HPV Malignancies.Seminars in radiation oncology · 2021
    Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Chaya LevovitzThe Icahn School of Medicine at Mount Sinai, New York, New York. Department of Immunology, Icahn School of Medicine at Mount Sinai, New York, New York. Institute for Translational Epidemiology, Icahn School of Medicine at Mount Sinai, New York, New York.
Dan ChenSciLifeLab Uppsala, Rudbeck Laboratory, Uppsala University, Uppsala, Sweden.
Emma IvanssonSciLifeLab Uppsala, Rudbeck Laboratory, Uppsala University, Uppsala, Sweden.
Ulf GyllenstenSciLifeLab Uppsala, Rudbeck Laboratory, Uppsala University, Uppsala, Sweden.
John P FinniganThe Icahn School of Medicine at Mount Sinai, New York, New York.
Sara AlshawishThe Icahn School of Medicine at Mount Sinai, New York, New York.
Weijia ZhangMount Sinai Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, New York.
Eric E SchadtDepartment of Oncological Sciences, Icahn School of Medicine at Mount Sinai, New York, New York. Mount Sinai Institute for Genomics and Multiscale Biology, New York, New York.
Marshal R PosnerThe Icahn School of Medicine at Mount Sinai, New York, New York. Department of Otolaryngology-Head and Neck Surgery, Icahn School of Medicine at Mount Sinai, New York, New York.
Eric M GendenThe Icahn School of Medicine at Mount Sinai, New York, New York. Department of Otolaryngology-Head and Neck Surgery, Icahn School of Medicine at Mount Sinai, New York, New York. Department of Immunology, Genetics and Pathology, Tisch Cancer Institute, New York, New York.
Paolo BoffettaThe Icahn School of Medicine at Mount Sinai, New York, New York. Institute for Translational Epidemiology, Icahn School of Medicine at Mount Sinai, New York, New York. Department of Immunology, Genetics and Pathology, Tisch Cancer Institute, New York, New York.
Andrew G SikoraThe Icahn School of Medicine at Mount Sinai, New York, New York. Department of Immunology, Icahn School of Medicine at Mount Sinai, New York, New York. Department of Oncological Sciences, Icahn School of Medicine at Mount Sinai, New York, New York. Department of Otolaryngology-Head and Neck Surgery, Icahn School of Medicine at Mount Sinai, New York, New York. Department of Immunology, Genetics and Pathology, Tisch Cancer Institute, New York, New York. andrew.sikora@bcm.edu.
Icahn School of Medicine at Mount Sinai · US

Funding

TARGETING INOS TO INHIBIT MYELOID-DERIVED SUPPRESSOR CELLS (MDSC) IN MELANOMAK08CA154963 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI SIKORA, ANDREW · 2011 to 2015
$674k
Role of Activated EGFR and COX-2 in Metastasis and Escape from Tumor DormancyR03DE021741 · NIDCR · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI SIKORA, ANDREW · 2011 to 2012
$254k
Exploring the Association Between Immune-Related Genetic Variation and HNSCCF30CA165615 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI LEVOVITZ, CHAYA · 2012 to 2015
$153k
NCI NIH HHS 1F30CA165615-01NCI NIH HHS 1K08CA154963-01A1NCI NIH HHS F30 CA165615NCI NIH HHS K08 CA154963NIDCR NIH HHS 5R03DE021741-02NIDCR NIH HHS R03 DE021741
6 · The paper itself

Abstract

Only a minority of those exposed to human papillomavirus (HPV) develop HPV-related cervical and oropharyngeal cancer. Because host immunity affects infection and progression to cancer, we tested the hypothesis that genetic variation in immune-related genes is a determinant of susceptibility to oropharyngeal cancer and other HPV-associated cancers by performing a multitier integrative computational analysis with oropharyngeal cancer data from a head and neck cancer genome-wide association study (GWAS). Independent analyses, including single-gene, gene-interconnectivity, protein-protein interaction, gene expression, and pathway analysis, identified immune genes and pathways significantly associated with oropharyngeal cancer. TGFβR1, which intersected all tiers of analysis and thus selected for validation, replicated significantly in the head and neck cancer GWAS limited to HPV-seropositive cases and an independent cervical cancer GWAS. The TGFβR1 containing p38-MAPK pathway was significantly associated with oropharyngeal cancer and cervical cancer, and TGFβR1 was overexpressed in oropharyngeal cancer, cervical cancer, and HPV(+) head and neck cancer tumors. These concordant analyses implicate TGFβR1 signaling as a process dysregulated across HPV-related cancers. This study demonstrates that genetic variation in immune-related genes is associated with susceptibility to oropharyngeal cancer and implicates TGFβR1/TGFβ signaling in the development of both oropharyngeal cancer and cervical cancer. Better understanding of the immunogenetic basis of susceptibility to HPV-associated cancers may provide insight into host/virus interactions and immune processes dysregulated in the minority of HPV-exposed individuals who progress to cancer.

Indexed as

FemaleGenome-Wide Association StudyHost-Pathogen InteractionsHumansMAP Kinase Signaling SystemNeoplasmsp38 Mitogen-Activated Protein KinasesPapillomaviridaePapillomavirus InfectionsPolymorphism, Single NucleotideProtein Serine-Threonine KinasesReceptors, Transforming Growth Factor betaReceptor, Transforming Growth Factor-beta Type ITransforming Growth Factor betap38 Mitogen-Activated Protein KinasesProtein Serine-Threonine KinasesReceptors, Transforming Growth Factor betaReceptor, Transforming Growth Factor-beta Type ITransforming Growth Factor beta

Identifiers

PMID25273091
PMCPMC4496416
OpenAlexW2048715972

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.