Evidence map›Paper›PMID 25271326›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

SPX1 is a phosphate-dependent inhibitor of Phosphate Starvation Response 1 in Arabidopsis.

María Isabel Puga, Isabel Mateos, Rajulu Charukesi, Zhiye Wang, José M Franco-Zorrilla, Laura de Lorenzo, María L Irigoyen, Simona Masiero, Regla Bustos, José Rodríguez and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 238 papers.

0numbers the graph read from it
0cells of the map it votes in
238citing papers in PubMed
31.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

238 citing papers in PubMed, 487 citations in OpenAlex.

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178 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 3 countries.

María Isabel PugaDepartments of Plant Molecular Genetics and.
Isabel MateosDepartments of Plant Molecular Genetics and.
Rajulu CharukesiDepartments of Plant Molecular Genetics and.
Zhiye WangState Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou 310058, China; and.
José M Franco-ZorrillaGenomics Unit, Centro Nacional de Biotecnología, Consejo Superior de Investigaciones Cientificas, 28049 Madrid, Spain;
Laura de LorenzoDepartments of Plant Molecular Genetics and.
María L IrigoyenDepartments of Plant Molecular Genetics and.
Simona MasieroDepartment of Plant Molecular Genetics, Max-Planck-Institut für Züchtungsforschung, 50829 Cologne, Germany.
Regla BustosDepartments of Plant Molecular Genetics and.
José RodríguezCellular and Molecular Biology, and.
Antonio LeyvaDepartments of Plant Molecular Genetics and.
Vicente RubioDepartments of Plant Molecular Genetics and.
Hans SommerDepartment of Plant Molecular Genetics, Max-Planck-Institut für Züchtungsforschung, 50829 Cologne, Germany.
Javier Paz-AresDepartments of Plant Molecular Genetics and jpazares@cnb.csic.es.
Max Planck Institute for Plant Breeding Research · DECentro Nacional de Biotecnología · ESState Key Laboratory of Plant Physiology and Biochemistry

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To cope with growth in low-phosphate (Pi) soils, plants have evolved adaptive responses that involve both developmental and metabolic changes. Phosphate Starvation Response 1 (PHR1) and related transcription factors play a central role in the control of Pi starvation responses (PSRs). How Pi levels control PHR1 activity, and thus PSRs, remains to be elucidated. Here, we identify a direct Pi-dependent inhibitor of PHR1 in Arabidopsis, SPX1, a nuclear protein that shares the SPX domain with yeast Pi sensors and with several Pi starvation signaling proteins from plants. Double mutation of SPX1 and of a related gene, SPX2, resulted in molecular and physiological changes indicative of increased PHR1 activity in plants grown in Pi-sufficient conditions or after Pi refeeding of Pi-starved plants but had only a limited effect on PHR1 activity in Pi-starved plants. These data indicate that SPX1 and SPX2 have a cellular Pi-dependent inhibitory effect on PHR1. Coimmunoprecipitation assays showed that the SPX1/PHR1 interaction in planta is highly Pi-dependent. DNA-binding and pull-down assays with bacterially expressed, affinity-purified tagged SPX1 and ΔPHR1 proteins showed that SPX1 is a competitive inhibitor of PHR1 binding to its recognition sequence, and that its efficiency is highly dependent on the presence of Pi or phosphite, a nonmetabolizable Pi analog that can repress PSRs. The relative strength of the SPX1/PHR1 interaction is thus directly influenced by Pi, providing a link between Pi perception and signaling.

Indexed as

ArabidopsisArabidopsis ProteinsDNA, PlantModels, BiologicalMutationNuclear ProteinsPhosphatesProtein BindingTranscription FactorsArabidopsis ProteinsDNA, PlantNuclear ProteinsPhosphatesPHR1 protein, ArabidopsisSPX1 protein, ArabidopsisTranscription Factorsphosphate sensorphosphate starvation signaling

Identifiers

PMID25271326
PMCPMC4205628
OpenAlexW2036501841

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.