Evidence map›Paper›PMID 25270717›Full record

ArticlePediatric nephrology (Berlin, Germany)2015

Copy-number variation associated with congenital anomalies of the kidney and urinary tract.

Georgina Caruana, Milagros N Wong, Amanda Walker, Yves Heloury, Nathalie Webb, Lilian Johnstone, Paul A James, Trent Burgess, John F Bertram

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Article in Pediatric nephrology (Berlin, Germany), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 73 citations in OpenAlex.

  1. Article
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  8. The genetics and pathogenesis of CAKUT.Nature reviews. Nephrology · 2023
    Review
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  16. Article
  17. A practical approach to the genomics of kidney disorders.Pediatric nephrology (Berlin, Germany) · 2022
    Review
  18. Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Georgina CaruanaDepartment of Anatomy and Developmental Biology, Monash University, Clayton, VIC, Australia, georgina.caruana@monash.edu.
Milagros N Wong
Amanda Walker
Yves Heloury
Nathalie Webb
Lilian Johnstone
Paul A James
Trent Burgess
John F Bertram
Monash University · AUMurdoch Children's Research Institute · AURoyal Children's Hospital · AUMonash Children’s Hospital · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe most common cause of end-stage renal disease in children can be attributed to congenital anomalies of the kidney and urinary tract (CAKUT). Despite this high incidence of disease, the genetic mutations responsible for the majority of CAKUT cases remain unknown.

methodsTo identify novel genomic regions associated with CAKUT, we screened 178 children presenting with the entire spectrum of structural anomalies associated with CAKUT for submicroscopic chromosomal imbalances (deletions or duplications) using single-nucleotide polymorphism (SNP) microarrays.

resultsCopy-number variation (CNV) was detected in 10.1 % (18/178) of the patients; in 6.2 % of the total cohort, novel duplications or deletions of unknown significance were identified, and the remaining 3.9 % harboured CNV of known pathogenicity. CNVs were inherited in 90 % (9/10) of the families tested. In this cohort, patients diagnosed with multicystic dysplastic kidney (30 %) and posterior urethral valves (24 %) had a higher incidence of CNV.

conclusionsThe genes contained in the altered genomic regions represent novel candidates for CAKUT. This study has demonstrated that a significant proportion of patients with CAKUT harbour submicroscopic chromosomal imbalances, warranting screening in clinics for CNV.

Indexed as

DNA Copy Number VariationsAdolescentChildChild, PreschoolFemaleHumansInfantInfant, NewbornMalePolymorphism, Single NucleotideUrogenital AbnormalitiesVesico-Ureteral Reflux

Identifiers

PMID25270717
OpenAlexW1966786568

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.