Evidence map›Paper›PMID 25268942›Full record

ArticlePloS one2014

A common minimal motif for the ligands of HLA-B*27 class I molecules.

Alejandro Barriga, Elena Lorente, Carolina Johnstone, Carmen Mir, Margarita del Val, Daniel López

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 88% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Alejandro BarrigaCentro Nacional de Microbiología, Instituto de Salud Carlos III, Majadahonda, Madrid, Spain.
Elena LorenteCentro Nacional de Microbiología, Instituto de Salud Carlos III, Majadahonda, Madrid, Spain.
Carolina JohnstoneCentro Nacional de Microbiología, Instituto de Salud Carlos III, Majadahonda, Madrid, Spain.
Carmen MirCentro Nacional de Microbiología, Instituto de Salud Carlos III, Majadahonda, Madrid, Spain.
Margarita del ValCentro de Biología Molecular Severo Ochoa, CSIC/Universidad Autónoma de Madrid, Madrid, Spain.
Daniel LópezCentro Nacional de Microbiología, Instituto de Salud Carlos III, Majadahonda, Madrid, Spain.
Instituto de Salud Carlos III · ESCentro de Biología Molecular Severo Ochoa · ESCentro Nacional de Microbiologia · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

CD8(+) T cells identify and kill infected cells through the specific recognition of short viral antigens bound to human major histocompatibility complex (HLA) class I molecules. The colossal number of polymorphisms in HLA molecules makes it essential to characterize the antigen-presenting properties common to large HLA families or supertypes. In this context, the HLA-B*27 family comprising at least 100 different alleles, some of them widely distributed in the human population, is involved in the cellular immune response against pathogens and also associated to autoimmune spondyloarthritis being thus a relevant target of study. To this end, HLA binding assays performed using nine HLA-B*2705-restricted ligands endogenously processed and presented in virus-infected cells revealed a common minimal peptide motif for efficient binding to the HLA-B*27 family. The motif was independently confirmed using four unrelated peptides. This experimental approach, which could be easily transferred to other HLA class I families and supertypes, has implications for the validation of new bioinformatics tools in the functional clustering of HLA molecules, for the identification of antiviral cytotoxic T lymphocyte responses, and for future vaccine development.

Indexed as

Amino Acid MotifsAnimalsAntigen PresentationAntigens, ViralCell LineHLA-B27 AntigenHumansLigandsMiceProtein BindingProtein StabilityRespiratory Syncytial Virus, HumanViral ProteinsAntigens, ViralHLA-B*27:05 antigenHLA-B27 AntigenLigandsViral Proteins

Identifiers

PMID25268942
PMCPMC4182091
OpenAlexW2055907666

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.