Evidence map›Paper›PMID 25268502›Full record

ArticlePloS one2014

Genome-wide association study reveals novel quantitative trait Loci associated with resistance to multiple leaf spot diseases of spring wheat.

Suraj Gurung, Sujan Mamidi, J Michael Bonman, Mai Xiong, Gina Brown-Guedira, Tika B Adhikari

Abstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 94 papers.

0numbers the graph read from it
0cells of the map it votes in
94citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

94 citing papers in PubMed.

  1. Identification of septoria nodorum blotch susceptibility genes in hard winter wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
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  4. Genome-Wide Association Mapping of Resistance toPlants (Basel, Switzerland) · 2026
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  7. Genome-wide association mapping of native QTLs for Fusarium head blight resistance in US winter wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
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  12. Genetic mapping of QTLs for resistance to bacterial leaf streak in hexaploid wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  13. Prediction of resistance, virulence, and host-by-pathogen interactions using dual-genome prediction models.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
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34 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Suraj GurungDepartment of Plant Pathology, University of California Davis, United States Department of Agriculture-Agricultural Research Service (USDA-ARS), Salinas, California, United States of America.
Sujan MamidiDepartment of Plant Sciences, North Dakota State University, Fargo, North Dakota, United States of America.
J Michael BonmanUSDA-ARS, Small Grains and Potato Germplasm Research Unit, Aberdeen, Idaho, United States of America.
Mai XiongUSDA-ARS, Plant Science Research Unit, Department of Crop Science, North Carolina State University, Raleigh, North Carolina, United States of America.
Gina Brown-GuediraUSDA-ARS, Plant Science Research Unit, Department of Crop Science, North Carolina State University, Raleigh, North Carolina, United States of America.
Tika B AdhikariCenter for Integrated Pest Management and Department of Plant Pathology, North Carolina State University, Raleigh, North Carolina, United States of America.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Accelerated wheat development and deployment of high-yielding, climate resilient, and disease resistant cultivars can contribute to enhanced food security and sustainable intensification. To facilitate gene discovery, we assembled an association mapping panel of 528 spring wheat landraces of diverse geographic origin for a genome-wide association study (GWAS). All accessions were genotyped using an Illumina Infinium 9K wheat single nucleotide polymorphism (SNP) chip and 4781 polymorphic SNPs were used for analysis. To identify loci underlying resistance to the major leaf spot diseases and to better understand the genomic patterns, we quantified population structure, allelic diversity, and linkage disequilibrium. Our results showed 32 loci were significantly associated with resistance to the major leaf spot diseases. Further analysis identified QTL effective against major leaf spot diseases of wheat which appeared to be novel and others that were previously identified by association analysis using Diversity Arrays Technology (DArT) and bi-parental mapping. In addition, several identified SNPs co-localized with genes that have been implicated in plant disease resistance. Future work could aim to select the putative novel loci and pyramid them in locally adapted wheat cultivars to develop broad-spectrum resistance to multiple leaf spot diseases of wheat via marker-assisted selection (MAS).

Indexed as

Chromosomes, PlantGenome, PlantAllelesAscomycotaBacteriaChromosome MappingGenetic MarkersGenetic VariationGenome-Wide Association StudyGenotypeLinkage DisequilibriumPlant DiseasesPlant ImmunityPolymorphism, Single NucleotideQuantitative Trait LociSeasonsGenetic Markers

Identifiers

PMID25268502
PMCPMC4182470

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.