Evidence map›Paper›PMID 25267679›Full record

ArticleAntimicrobial agents and chemotherapy2014

Small-molecule inhibitors of the pseudaminic acid biosynthetic pathway: targeting motility as a key bacterial virulence factor.

Robert Ménard, Ian C Schoenhofen, Limei Tao, Annie Aubry, Patrice Bouchard, Christopher W Reid, Paule Lachance, Susan M Twine, Kelly M Fulton, Qizhi Cui and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 49 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Flavodoxins as Novel Therapeutic Targets againstInternational journal of molecular sciences · 2020
    Review
  14. Review
  15. Article
  16. Polar Flagella Glycosylation inFrontiers in microbiology · 2020
    Article
  17. Survival Mechanisms ofFrontiers in microbiology · 2019
    Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Robert MénardBiologics Program, Human Health Therapeutics, National Research Council Canada, Montreal, Quebec, Canada.
Ian C SchoenhofenVaccine Program, Human Health Therapeutics, National Research Council Canada, Ottawa, Ontario, Canada.
Limei TaoBiologics Program, Human Health Therapeutics, National Research Council Canada, Montreal, Quebec, Canada.
Annie AubryVaccine Program, Human Health Therapeutics, National Research Council Canada, Ottawa, Ontario, Canada.
Patrice BouchardBiologics Program, Human Health Therapeutics, National Research Council Canada, Montreal, Quebec, Canada.
Christopher W ReidVaccine Program, Human Health Therapeutics, National Research Council Canada, Ottawa, Ontario, Canada.
Paule LachanceBiologics Program, Human Health Therapeutics, National Research Council Canada, Montreal, Quebec, Canada.
Susan M TwineVaccine Program, Human Health Therapeutics, National Research Council Canada, Ottawa, Ontario, Canada.
Kelly M FultonVaccine Program, Human Health Therapeutics, National Research Council Canada, Ottawa, Ontario, Canada.
Qizhi CuiBiologics Program, Human Health Therapeutics, National Research Council Canada, Montreal, Quebec, Canada.
Hervé HoguesBiologics Program, Human Health Therapeutics, National Research Council Canada, Montreal, Quebec, Canada.
Enrico O PurisimaBiologics Program, Human Health Therapeutics, National Research Council Canada, Montreal, Quebec, Canada.
Traian SuleaBiologics Program, Human Health Therapeutics, National Research Council Canada, Montreal, Quebec, Canada traian.sulea@nrc-cnrc.gc.ca susan.logan@nrc-cnrc.gc.ca.
Susan M LoganVaccine Program, Human Health Therapeutics, National Research Council Canada, Ottawa, Ontario, Canada traian.sulea@nrc-cnrc.gc.ca susan.logan@nrc-cnrc.gc.ca.ORCID http://orcid.org/0000-0001-6400-5829
National Research Council Canada · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Helicobacter pylori is motile by means of polar flagella, and this motility has been shown to play a critical role in pathogenicity. The major structural flagellin proteins have been shown to be glycosylated with the nonulosonate sugar, pseudaminic acid (Pse). This glycan is unique to microorganisms, and the process of flagellin glycosylation is required for H. pylori flagellar assembly and consequent motility. As such, the Pse biosynthetic pathway offers considerable potential as an antivirulence drug target, especially since motility is required for H. pylori colonization and persistence in the host. This report describes screening the five Pse biosynthetic enzymes for small-molecule inhibitors using both high-throughput screening (HTS) and in silico (virtual screening [VS]) approaches. Using a 100,000-compound library, 1,773 hits that exhibited a 40% threshold inhibition at a 10 μM concentration were identified by HTS. In addition, VS efforts using a 1.6-million compound library directed at two pathway enzymes identified 80 hits, 4 of which exhibited reasonable inhibition at a 10 μM concentration in vitro. Further secondary screening which identified 320 unique molecular structures or validated hits was performed. Following kinetic studies and structure-activity relationship (SAR) analysis of selected inhibitors from our refined list of 320 compounds, we demonstrated that three inhibitors with 50% inhibitory concentrations (IC50s) of approximately 14 μM, which belonged to a distinct chemical cluster, were able to penetrate the Gram-negative cell membrane and prevent formation of flagella.

Indexed as

Anti-Bacterial AgentsBiological TransportCell MembraneCell Membrane PermeabilityDrug DiscoveryFlagellaFlagellinGene ExpressionGlycosylationHelicobacter pyloriHigh-Throughput Screening AssaysMolecular Docking SimulationMovementSmall Molecule LibrariesStructure-Activity RelationshipSugar Acids5,7-diacetamido-3,5,7,9-tetradeoxynonulosonic acidAnti-Bacterial AgentsFlagellinSmall Molecule LibrariesSugar Acids

Identifiers

PMID25267679
PMCPMC4249573
OpenAlexW2053131514

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.