Evidence map›Paper›PMID 25267447›Full record

ArticleGenome biology and evolution2014

Algae sense exact temperatures: small heat shock proteins are expressed at the survival threshold temperature in Cyanidioschyzon merolae and Chlamydomonas reinhardtii.

Yusuke Kobayashi, Naomi Harada, Yoshiki Nishimura, Takafumi Saito, Mami Nakamura, Takayuki Fujiwara, Tsuneyoshi Kuroiwa, Osami Misumi

Open access · goldAbstract read
In one paragraph

Article in Genome biology and evolution, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 84 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Yusuke KobayashiLaboratory of Plant Molecular Genetics, Department of Botany, Kyoto University, Oiwake-cho, Kita-Shirakawa, Kyoto, Japan.
Naomi HaradaLaboratory of Plant Molecular Genetics, Department of Botany, Kyoto University, Oiwake-cho, Kita-Shirakawa, Kyoto, Japan.
Yoshiki NishimuraLaboratory of Plant Molecular Genetics, Department of Botany, Kyoto University, Oiwake-cho, Kita-Shirakawa, Kyoto, Japan.
Takafumi SaitoDepartment of Biological Science and Chemistry, Faculty of Science, Graduate School of Medicine, Yamaguchi University, Yamaguchi, Japan.
Mami NakamuraSymbiosis and Cell Evolution Laboratory, Center for Frontier Research, National Institute of Genetics, Mishima, Shizuoka, Japan.
Takayuki FujiwaraSymbiosis and Cell Evolution Laboratory, Center for Frontier Research, National Institute of Genetics, Mishima, Shizuoka, Japan.
Tsuneyoshi KuroiwaFaculty of Science, Rikkyo University, Toshima-ku, Tokyo, Japan Core Research for Evolutional Science and Technology (CREST, JST), Japan Science and Technology Agency, Kawaguchi, Japan.
Osami MisumiDepartment of Biological Science and Chemistry, Faculty of Science, Graduate School of Medicine, Yamaguchi University, Yamaguchi, Japan Core Research for Evolutional Science and Technology (CREST, JST), Japan Science and Technology Agency, Kawaguchi, Japan misumi@yamaguchi-u.ac.jp.
Kyoto University · JPJapan Science and Technology Agency · JPNational Institute of Genetics · JPYamaguchi University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The primitive red alga Cyanidioschyzon merolae inhabits acidic hot springs and shows robust resistance to heat shock treatments up to 63 °C. Microarray analysis was performed to identify the key genes underlying the high temperature tolerance of this organism. Among the upregulated genes that were identified, we focused on two small heat shock proteins (sHSPs) that belong to a unique class of HSP families. These two genes are located side by side in an inverted repeat orientation on the same chromosome and share a promoter. These two genes were simultaneously and rapidly upregulated in response to heat shock treatment (>1,000-fold more than the control). Interestingly, upregulation appeared to be triggered not by a difference in temperatures, but rather by the absolute temperature. Similar sHSP structural genes have been reported in the green alga Chlamydomonas reinhardtii, but the threshold temperature for the expression of these sHSP-encoding genes in Ch. reinhardtii was different from the threshold temperature for the expression of the sHSP genes from Cy. merolae. These results indicate the possible importance of an absolute temperature sensing system in the evolution and tolerance of high-temperature conditions among unicellular microalgae.

Indexed as

Amino Acid SequenceChlamydomonasChlamydomonas reinhardtiiGene Expression Regulation, PlantHeat-Shock Proteins, SmallMolecular Sequence DataPhylogenyPlant ProteinsTemperatureHeat-Shock Proteins, SmallPlant Proteinsenvironmental adaptationheat resistanceHSPmicroarrayunicellular algae

Identifiers

PMID25267447
PMCPMC4224343
OpenAlexW2132685019

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.