ArticlePloS one2014
De novo transcriptome of the Hemimetabolous German cockroach (Blattella germanica).
Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
16 citing papers in PubMed, 32 citations in OpenAlex.
- Review
- The separation between mRNA-ends is more variable than expected.FEBS open bio · 2024Article
- Utility of cockroach as a model organism in the assessment of toxicological impacts of environmental pollutants.Environmental advances · 2022Article
- Identification and functional characterization of the German cockroach, Blattella germanica, short interspersed nuclear elements.PloS one · 2022Article
- Article
- Transcriptome Responses to Defined Insecticide Selection Pressures in the German Cockroach (Frontiers in physiology · 2021Article
- Enormous expansion of the chemosensory gene repertoire in the omnivorous German cockroach Blattella germanica.Journal of experimental zoology. Part B, Molecular and developmental evolution · 2018Article
- Expansions of key protein families in the German cockroach highlight the molecular basis of its remarkable success as a global indoor pest.Journal of experimental zoology. Part B, Molecular and developmental evolution · 2018Article
- De novo RNA-seq and functional annotation of Ornithonyssus bacoti.Experimental & applied acarology · 2018Article
- De novo transcriptome and expression profile analyses of the Asian corn borer (Ostrinia furnacalis) reveals relevant flubendiamide response genes.BMC genomics · 2017Article
- Identification and tissue expression profile of genes from three chemoreceptor families in an urban pest, Periplaneta americana.Scientific reports · 2016Article
- De Novo Transcriptome Analysis and Detection of Antimicrobial Peptides of the American Cockroach Periplaneta americana (Linnaeus).PloS one · 2016Article
- De novo Transcriptome Analysis of Chinese Citrus Fly, Bactrocera minax (Diptera: Tephritidae), by High-Throughput Illumina Sequencing.PloS one · 2016Article
- Transcriptome Characterization for Non-Model Endangered Lycaenids, Protantigius superans and Spindasis takanosis, Using Illumina HiSeq 2500 Sequencing.International journal of molecular sciences · 2015Article
- De Novo Assembly and Characterization of Fruit Transcriptome in Black Pepper (Piper nigrum).PloS one · 2015Article
- De novo transcriptome assembly of the lobster cockroach Nauphoeta cinerea (Blaberidae).Genetics and molecular biologyArticle
Corrections and comments
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Authors and funding
6 authors at 4 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundThe German cockroach, Blattella germanica, is an important insect pest that transmits various pathogens mechanically and causes severe allergic diseases. This insect has long served as a model system for studies of insect biology, physiology and ecology. However, the lack of genome or transcriptome information heavily hinder our further understanding about the German cockroach in every aspect at a molecular level and on a genome-wide scale. To explore the transcriptome and identify unique sequences of interest, we subjected the B. germanica transcriptome to massively parallel pyrosequencing and generated the first reference transcriptome for B. germanica. METHODOLOGY/PRINCIPAL
findingsA total of 1,365,609 raw reads with an average length of 529 bp were generated via pyrosequencing the mixed cDNA library from different life stages of German cockroach including maturing oothecae, nymphs, adult females and males. The raw reads were de novo assembled to 48,800 contigs and 3,961 singletons with high-quality unique sequences. These sequences were annotated and classified functionally in terms of BLAST, GO and KEGG, and the genes putatively coding detoxification enzyme systems, insecticide targets, key components in systematic RNA interference, immunity and chemoreception pathways were identified. A total of 3,601 SSRs (Simple Sequence Repeats) loci were also predicted. CONCLUSIONS/SIGNIFICANCE: The whole transcriptome pyrosequencing data from this study provides a usable genetic resource for future identification of potential functional genes involved in various biological processes.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.