ArticleJournal of cheminformatics2014
InCHlib - interactive cluster heatmap for web applications.
Article in Journal of cheminformatics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
34 citing papers in PubMed.
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- Unveiling the molecular mechanisms of the stress resilience of High Arctic Klebsormidium flaccidum: a multifaceted study.Plant & cell physiology · 2025Article
- Removal of hydrogen sulfide (H3 Biotech · 2025Article
- Dosimetric Predictors of Acute Radiation Pneumonitis and Esophagitis in Hypofractionated Thoracic Irradiation of Non-Small Cell Lung Cancer Patients With Poor Prognostic Factors.Advances in radiation oncology · 2025Article
- ECBD: European chemical biology database.Nucleic acids research · 2025Article
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- The IMG/M data management and analysis system v.7: content updates and new features.Nucleic acids research · 2023Article
- Temporal and sequential transcriptional dynamics define lineage shifts in corticogenesis.The EMBO journal · 2022Article
- Increasing buffering capacity enhances rumen fermentation characteristics and alters rumen microbiota composition of high-concentrate fed Hanwoo steers.Scientific reports · 2022Article
- Article
- Commentary: the first twelve years of the Journal of chemoinformatics.Journal of cheminformatics · 2022Article
- Examining stigma relating to substance use and contextual factors in social media discussions.Drug and alcohol dependence reports · 2022Article
- REGENOMICS: A web-based application for plant REGENeration-associated transcriptOMICS analyses.Computational and structural biotechnology journal · 2022Article
- Diet Transition from High-Forage to High-Concentrate Alters Rumen Bacterial Community Composition, Epithelial Transcriptomes and Ruminal Fermentation Parameters in Dairy Cows.Animals : an open access journal from MDPI · 2021Article
- Nuclear Magnetic Resonance (NMR)-Based Quantification on Flavor-Active and Bioactive Compounds and Application for Distinguishment of Chicken Breeds.Food science of animal resources · 2021Article
- Characteristic Metabolic Changes of the Crust from Dry-Aged Beef Using 2D NMR Spectroscopy.Molecules (Basel, Switzerland) · 2020Article
- Transcriptome and Network Analyses of Heterostyly inPlants (Basel, Switzerland) · 2020Article
- Revisiting the Metabolic Capabilities ofMicroorganisms · 2020Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
3 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundHierarchical clustering is an exploratory data analysis method that reveals the groups (clusters) of similar objects. The result of the hierarchical clustering is a tree structure called dendrogram that shows the arrangement of individual clusters. To investigate the row/column hierarchical cluster structure of a data matrix, a visualization tool called 'cluster heatmap' is commonly employed. In the cluster heatmap, the data matrix is displayed as a heatmap, a 2-dimensional array in which the colour of each element corresponds to its value. The rows/columns of the matrix are ordered such that similar rows/columns are near each other. The ordering is given by the dendrogram which is displayed on the side of the heatmap.
resultsWe developed
conclusionsThe cluster heatmap is one of the most popular visualizations of large chemical and biomedical data sets originating, e.g., in high-throughput screening, genomics or transcriptomics experiments. The presented
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.