Evidence map›Paper›PMID 25264203›Full record

ArticleBiochemical and biophysical research communications2014

The dispensability and requirement of SecA N-terminal aminoacyl residues for complementation, membrane binding, lipid-specific domains and channel activities.

Jeanetta Holley Floyd, Zhipeng You, Ying-Hsin Hsieh, Yamin Ma, Hsuichin Yang, Phang C Tai

Abstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Specific cardiolipin-SecY interactions are required for proton-motive force stimulation of protein secretion.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Characterization of the minimal length of functional SecA in Escherichia coli.Biochemical and biophysical research communications · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jeanetta Holley FloydDepartment of Biology, Center of Biotechnology and Drug Design, Georgia State University, Atlanta, GA 30303, United States.
Zhipeng YouDepartment of Biology, Center of Biotechnology and Drug Design, Georgia State University, Atlanta, GA 30303, United States.
Ying-Hsin HsiehDepartment of Biology, Center of Biotechnology and Drug Design, Georgia State University, Atlanta, GA 30303, United States.
Yamin MaDepartment of Biology, Center of Biotechnology and Drug Design, Georgia State University, Atlanta, GA 30303, United States.
Hsuichin YangDepartment of Biology, Center of Biotechnology and Drug Design, Georgia State University, Atlanta, GA 30303, United States.
Phang C TaiDepartment of Biology, Center of Biotechnology and Drug Design, Georgia State University, Atlanta, GA 30303, United States. Electronic address: biopct@gsu.edu.

Funding

PROTEIN TRANSLOCATION &EXPORT IN GRAM-NEGATIVE BACTERIAR01GM034766 · NIGMS · GEORGIA STATE UNIVERSITY · PI TAI, PHANG C. · 1985 to 2005
$2.5M
NIGMS NIH HHS GM34766NIGMS NIH HHS R01 GM034766
6 · The paper itself

Abstract

SecA is an essential multifunctional protein for the translocation of proteins across bacterial membranes. Though SecA is known to function in the membrane, the detailed mechanism for this process remains unclear. In this study we constructed a series of SecA N-terminal deletions and identified two specific domains crucial for initial SecA/membrane interactions. The first small helix, the linker and part of the second helix (Δ2-22) were found to be dispensable for SecA activity in complementing the growth of a SecA ts mutant. However, deletions of N-terminal aminoacyl residues 23-25 resulted in severe progressive retardation of growth. Moreover, a decrease of SecA activity caused by N-terminal deletions correlated to the loss of SecA membrane binding, formation of lipid-specific domains and channel activity. All together, the results indicate that the N-terminal aminoacyl residues 23-25 play a critical role for SecA binding to membranes and that the N-terminal limit of SecA for activity is at the 25th amino acid.

Indexed as

Adenosine TriphosphatasesAmino Acid SequenceBacterial ProteinsEscherichia coliEscherichia coli ProteinsGenes, BacterialGenetic Complementation TestIon ChannelsLipid-Linked ProteinsMembrane LipidsMembranesMembrane Transport ProteinsMolecular Sequence DataPeptide FragmentsProtein BindingProtein StabilityAdenosine TriphosphatasesBacterial ProteinsEscherichia coli ProteinsIon ChannelsLipid-Linked ProteinsMembrane LipidsMembrane Transport ProteinsPeptide FragmentsSecA ProteinsSEC Translocation ChannelsChannel activityComplementationMembrane bindingProtein translocationSecA N-termini

Identifiers

PMID25264203
PMCPMC4250336

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.