Evidence map›Paper›PMID 25264194›Full record

ArticleBiochemical and biophysical research communications2014

Upstream open reading frame in 5'-untranslated region reduces titin mRNA translational efficiency.

Adrian G Cadar, Lin Zhong, Angel Lin, Mauricio O Valenzuela, Chee C Lim

Abstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.1field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 39 citations in OpenAlex.

  1. Functional analysis ofMolecular therapy. Nucleic acids · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Adrian G CadarDivision of Cardiovascular Medicine, Vanderbilt University School of Medicine, Nashville, TN, United States; Department of Molecular Physiology & Biophysics, Vanderbilt University School of Medicine, Nashville, TN, United States.
Lin ZhongDivision of Cardiovascular Medicine, Vanderbilt University School of Medicine, Nashville, TN, United States.
Angel LinDivision of Cardiovascular Medicine, Vanderbilt University School of Medicine, Nashville, TN, United States.
Mauricio O ValenzuelaDepartment of Internal Medicine, Morsani College of Medicine, University of South Florida, Tampa, FL, United States.
Chee C LimDivision of Cardiovascular Medicine, Vanderbilt University School of Medicine, Nashville, TN, United States; Department of Molecular Physiology & Biophysics, Vanderbilt University School of Medicine, Nashville, TN, United States. Electronic address: chee.lim@vanderbilt.edu.
Vanderbilt University · USUniversity of South Florida · US

Funding

Vanderbilt/Meharry Initiative for Minority Student DvptR25GM062459 · NIGMS · VANDERBILT UNIVERSITY · PI VELEZ EDWARDS, DIGNA R · 2002 to 2020
$10.4M
Regulation and Maintenance of Cardiac Muscle Sarcomere IntegrityR01HL095813 · NHLBI · VANDERBILT UNIVERSITY · PI HONG, CHARLES C · 2010 to 2014
$2.1M
NHLBI NIH HHS R01 HL095813NHLBI NIH HHS R01HL095813NHLBI NIH HHS R01HL095813-S1NIGMS NIH HHS R25 GM062459
6 · The paper itself

Abstract

Titin is the largest known protein and a critical determinant of myofibril elasticity and sarcomere structure in striated muscle. Accumulating evidence that mRNA transcripts are post-transcriptionally regulated by specific motifs located in the flanking untranslated regions (UTRs) led us to consider the role of titin 5'-UTR in regulating its translational efficiency. Titin 5'-UTR is highly homologous between human, mouse, and rat, and sequence analysis revealed the presence of a stem-loop and two upstream AUG codons (uAUGs) converging on a shared in frame stop codon. We generated a mouse titin 5'-UTR luciferase reporter construct and targeted the stem-loop and each uAUG for mutation. The wild-type and mutated constructs were transfected into the cardiac HL-1 cell line and primary neonatal rat ventricular myocytes (NRVM). SV40 driven 5'-UTR luciferase activity was significantly suppressed by wild-type titin 5'-UTR (∼ 70% in HL-1 cells and ∼ 60% in NRVM). Mutating both uAUGs was found to alleviate titin 5'-UTR suppression, while eliminating the stem-loop had no effect. Treatment with various growth stimuli: pacing, PMA or neuregulin had no effect on titin 5'-UTR luciferase activity. Doxorubicin stress stimuli reduced titin 5'-UTR suppression, while H2O2 had no effect. A reported single nucleotide polymorphism (SNP) rs13422986 at position -4 of the uAUG2 was introduced and found to further repress titin 5'-UTR luciferase activity. We conclude that the uAUG motifs in titin 5'-UTR serve as translational repressors in the control of titin gene expression, and that mutations/SNPs of the uAUGs or doxorubicin stress could alter titin translational efficiency.

Indexed as

5' Untranslated RegionsAnimalsBase SequenceCell LineConnectinDoxorubicinGene Expression RegulationHalf-LifeHEK293 CellsHumansMiceMolecular Sequence DataMyocytes, CardiacOpen Reading FramesPolymorphism, Single NucleotideProtein Kinases5' Untranslated RegionsConnectinDoxorubicinProtein KinasesRNA, Messengertitin protein, mouseTTN protein, humanTtn protein, rat5′-UTRCardiomyocytesTitinTranslationTtnuORF

Identifiers

PMID25264194
PMCPMC4250383
OpenAlexW1967873040

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.