Evidence map›Paper›PMID 25263407›Full record

ArticleEuropean journal of immunology2015

Cross-reactivity of hepatitis C virus specific vaccine-induced T cells at immunodominant epitopes.

Christabel Kelly, Leo Swadling, Anthony Brown, Stefania Capone, Antonella Folgori, Mariolina Salio, Paul Klenerman, Eleanor Barnes

Open access · hybridAbstract read
In one paragraph

Article in European journal of immunology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 34 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Article
  4. Review
  5. Article
  6. CD8Frontiers in immunology · 2022
    Article
  7. Review
  8. Article
  9. Review
  10. Adaptive Immune Response against Hepatitis C Virus.International journal of molecular sciences · 2020
    Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Hepatitis C Vaccines, Antibodies, and T Cells.Frontiers in immunology · 2018
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Christabel KellyNuffield Department of Medicine, University of Oxford, Oxford, UK.
Leo Swadling
Anthony Brown
Stefania Capone
Antonella Folgori
Mariolina Salio
Paul Klenerman
Eleanor Barnes
University of Oxford · GBAltair Engineering (United States) · USMRC Human Immunology Unit · GBOxford BioMedica (United Kingdom) · GB

Funding

Virology CoreU19AI082630 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI RAYMOND T CHUNG, GEORG Michael LAUER · 2009 to 2026
$48.1M
Cancer Research UK C399/A2291Medical Research Council G0701694Medical Research Council G0901723Medical Research Council MR/K010239/1NIAID NIH HHS U19 AI082630Wellcome Trust 091663
6 · The paper itself

Abstract

Viral diversity is a challenge to the development of a hepatitis C virus (HCV) vaccine. Following vaccination of humans with adenoviral vectors, we determined the capacity of T cells to target common viral variants at immundominant epitopes ex vivo. We identified two major variants for epitopes NS3(1073) and NS3(1446), and multiple variants for epitope NS3(1406) that occurred in >5% of genotype 1 and 3 sequences at a population level. Cross-reactivity of vaccine-induced T cells was determined using variant peptides in IFN-γ ELISPOT assays. Vaccine-induced T cells targeted approximately 90% of NS3(1073) genotype 1 sequences and 50% of NS3(1446) genotype 1 and 3 sequences. For NS3(1406), 62% of subtype-1b sequences were targeted. Next, we assessed whether an in vitro priming system, using dendritic cells and T cells from healthy donors, could identify a variant of NS3(1406) that was maximally cross-reactive. In vitro priming assays showed that of those tested the NS3(1406) vaccine variant was the most immunogenic. T cells primed with genotype 1 variants from subtype 1a or 1b were broadly cross-reactive with other variants from the same subtype. We conclude that immunization with candidate HCV adenoviral vaccines generates cross-reactive T cells at immunodominant epitopes. The degree of cross-reactivity varies between epitopes and may be HCV-subtype specific.

Indexed as

Amino Acid SequenceAntigens, ViralCell LineCross ReactionsDEAD-box RNA HelicasesDendritic CellsEnzyme-Linked Immunospot AssayEpitopes, T-LymphocyteGenotypeHepacivirusHepatitis CHumansInterferon-gammaMolecular Sequence DataNucleoside-TriphosphatasePrimary Cell CultureAntigens, ViralDEAD-box RNA HelicasesEpitopes, T-LymphocyteInterferon-gammaNS3 protein, hepatitis C virusNucleoside-TriphosphataseSerine EndopeptidasesViral Hepatitis VaccinesViral Nonstructural ProteinsViral ProteasesAdenovirusEpitopesHepatitis C virusT cellsVaccinationVariability

Identifiers

PMID25263407
PMCPMC4784727
OpenAlexW1554290496

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.